| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0990 |
|---|
| Symbol | |
|---|
| ID | 8415280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 1201971 |
|---|
| End bp | 1203509 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645023954 |
|---|
| Product | C4-dicarboxylate anaerobic carrier |
|---|
| Protein accession | YP_003181351 |
|---|
| Protein GI | 257790745 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1288] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA GCGAGAACCA GAAGCTGGCG ACGGAAGCCG CCGAGGGCGC GCCCGTCGCC
GCGGCCCCCG AGCCCGGCGG CAAGAAGAAG CGCAAGAAGA AAGGCGCACC GGACTCCTTC
ATCATCCTCG TGGCGTGCCT GATCGTCGTG GCGCTCGTCA CCGTGGCGAT GTCGTTCTTC
ACGAGCGAGG TAACCGGAGC GTCGTTCGCC GACGTTCTGA CCTCCCCGGT GCTCGGCTTC
TCGAGCGCCA TGCAGGTGTG CGTGTTCGTG CTCGTGCTGG GCGGCTTTCT GGCCATGGTG
AACAAGACCG GCGCGCTCGA CACCGGCGTC GCCACGCTCG TACGCGCCCT CAAGGGCCGC
GAGCTCGTCC TCATCCCCAT CCTCATGCTG CTGTTCGGCA TCTGCGGCTC CACCTACGGC
ATGATGGAGG AGACGGTGCC GTTCTACATC CTGCTGGCCG CCACCATGTA CGCCGCGGGC
TTCGACACGC TCACCGGCGC GCTCGTGGTG CTGCTGGGCG CGGGCGCGGG CTGCATCGGC
TCCACGGTGA ACCCGTTCTC CGTCGGCGTG GCCACCGCCG CCCTCACCGA CATGGGCATC
GCCATCGACC AGGGCGTCAT CATCGGCTTC GGGCTCGTGC TGTTCGTCAT CGCCGAGGCC
ATCTCCATCT TCTTCGTCAT GCGCTACGCC AAGAAGGTCA AGGCCGACAA AGGCTCCACG
TTCCTGTCGT TGCAGGAGCA GGAGGAGTCC GAGAAGGAGT ACGGCCAGAT GGAGGAGGAT
GCGGAGAACC CGGCGTTCTC GGCCGTCCTC TCCGGCAAGC AGAAGGTCGT GCTCGTGCTG
TTCGCGCTCA CGTTCGTCGT CATGATCGTC GGCTTCGTAC CGTGGCAGAA CTTCGGCATC
GACGTCTTCA TGGCCGGCGG CTCGGTCGAC GACCCGGCGG GCGCCTGGAG CGCGGTGCTC
ACCGGCGTGC CGCTGGGCAT GTGGTACTTC AACGAGGCCA CGGCGTGGTT CCTGCTCATG
GCCATCGTCA TCGGCATCTT CGCGCGCTTC GCGGGCAAGG ACATCGTGAA GACGTTCCTC
GGCGGCTGCG CCGAGATGGT CAGCGTCGCG CTCGTCATCG CGCTTGCGCG CTCCGTCGCC
GTCATCATGG GCGAGACGCA ACTTGACACG TTCATCCTCA CGAACGCCGC GAACGCGCTG
TCCGGCGTGC CCGCCTTCAT CTTCGCGCCC GCCACGTTCC TGTTCTACTT CGTGCTGTCG
TTCGCCATCC CCTCGAGCTC CGGCATGGCC ACGCTGGCGA TGCCCATCAT GGGGCCGCTG
ACGAACGGCC TGGGCTTCTC GGCCGAGGTC ATGGTCATGA TCTACGTGGC CGCCCACGGC
CTCGTGGCCA TCATCACGCC GCTGAACGGC GCCGTGCTGG CGGGCCTCGC GCTGGCGAAG
GTGCAGTACG CCACCATGCT CAAGTGGGTG ATGAAGGTGA TCGTGGTCAC CGGCATCGTG
CTCGTGGTGG TGCTGACCGC GGCGATGCTC ATCATGTAG
|
|---|
| Protein sequence | MSESENQKLA TEAAEGAPVA AAPEPGGKKK RKKKGAPDSF IILVACLIVV ALVTVAMSFF
TSEVTGASFA DVLTSPVLGF SSAMQVCVFV LVLGGFLAMV NKTGALDTGV ATLVRALKGR
ELVLIPILML LFGICGSTYG MMEETVPFYI LLAATMYAAG FDTLTGALVV LLGAGAGCIG
STVNPFSVGV ATAALTDMGI AIDQGVIIGF GLVLFVIAEA ISIFFVMRYA KKVKADKGST
FLSLQEQEES EKEYGQMEED AENPAFSAVL SGKQKVVLVL FALTFVVMIV GFVPWQNFGI
DVFMAGGSVD DPAGAWSAVL TGVPLGMWYF NEATAWFLLM AIVIGIFARF AGKDIVKTFL
GGCAEMVSVA LVIALARSVA VIMGETQLDT FILTNAANAL SGVPAFIFAP ATFLFYFVLS
FAIPSSSGMA TLAMPIMGPL TNGLGFSAEV MVMIYVAAHG LVAIITPLNG AVLAGLALAK
VQYATMLKWV MKVIVVTGIV LVVVLTAAML IM
|
|---|
| |