| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0952 |
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| Symbol | |
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| ID | 8415242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Eggerthella lenta DSM 2243 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013204 |
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| Strand | - |
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| Start bp | 1158623 |
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| End bp | 1160233 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 645023916 |
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| Product | L-serine dehydratase, iron-sulfur-dependent, alpha subunit |
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| Protein accession | YP_003181313 |
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| Protein GI | 257790707 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00718] L-serine dehydratase, iron-sulfur-dependent, alpha subunit
[TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit
[TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00000235834 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACTC TCGGCCTCTC CGACGTCATC GGCCCCATCA TGGTGGGTCC TTCGAGCTCG
CACACGGCGG GCGCGCTGCG TATCGCCTAC ATGGCTCGAC GGCTGTGCCT GGCCGAGCCG
AAGACGGTGG AGTTCAGGCT GCTGGGGTCG TTCGCGCACA CGCTGACCGG GCACGGAACC
GACAAGGCCC TCGTGGCGGG CATGCTGGGG CTGGCCGCCG ACGACCTGCG CATCCGCGAC
TCGTTTCAGC TTGCGGGGGA TGCGGGACTC GCGTTCTCGT TCGTCACGCT TCCCGACGCG
GAATACGACC ATCCCAACAC CATCGACATG CACATCGTGG ACGCCGCGGG CAACGCGATG
AGCGTGCGCG GCGAGAGCAT CGGAGGCGGA GCGGCCGTCA TCCGCAAGAT CGACGACATC
GACGTGCGCA TCACCGGCGA GAGCACGAGC ATCGTCGTGC GCCAGCGCGA CGAGACCGGC
GTGCTGGCGC ACATCGCGCA GAGCATCAGC GACGAAGGCG TGAACATCGC CACCACGCGC
ATGTACCGCG AGCGCAAAGG CGACATCGCC TACACCGTGC TGGAAACCGA CCAAGAGGTG
GACGGCGCCG CGAAGGCCGC CATCGAGGAC CACCCCGCCA TCCTGGACGT GCGCGTCATT
CCCGGCGACG CGCGCCCCGG CTGCGGGTCC GTTGACGCGC CCGACGCGGA GGAGGCGCTG
CAGCGGTTCG CCGAGGCGGA CTTCGGCACC GGAGCCGCGC TTCTGGCATG GTGCGAAAAG
CACGGCACGA CGCTATCGGA GGCGTTTCTC GCCCGCGAGG CGGCGCTGGC CGAGAGCTTG
GGGTACGCCG ACCGCTCCCT CGCGTATTTG CACGAGACGC TGGACGTGAT GAAATGCGCC
GCGCAGCGCC CCATCGACGA AGCGCTGCCT TCCATGGGCG GCCTCATAGG CGGCGAAGCG
CGCAAGCTGG CCGATCTGCG CGAGCGCGAC GGCGAGCTGT GCGACGACCA GCTGTCGTGC
GCCATCGCCT ACGCGATGGC GGTGCTGGAG ACGAACGCGT CGATGGGTCG CATCGTGGCC
GCGCCCACGG CTGGATCGTC TGGCGTGCTG CCCGGCGTGC TGCTGGCGCT GCAGCGCACG
CGCGGGCTGT CGGATGGCGA TCTTGCGCGC GGCCTGGCGG CGGCCGCCGC CATCGGGTAC
CTCATCACGC GCAACGCCAC GGTATCGGGC GCGGAAGGCG GCTGCCAGGC CGAGATCGGC
TCGGCCGCCG CGATGGCCGC GGCGGCGTCG GTTGAGCTCA TGGGCGGCGC GCCCGCCCAA
TGCCTCGACG CGGCCAGCAA CGCGCTGACC AACATGATGG GCCTCGTATG CGACCCCATC
GCGGGTCTTG TCGAGGAACC TTGCCAGAAG CGCAACGCTG CCGGCGCCGC CGTCGCGCTG
GTCAGCGCGC AGATCGCACT CGCAGGCATC GGCAACCTGG TCGACTTCGA CCAGACGGTG
GAGGCTATGC GAAAAGTGGG TCGAACCTTG CCGTTCGAAC TGCGCGAAAG CGCTCTCGGG
GGCATAGCCG CCGCGCCGAC GGCCTGCGCC TACTGCCCGG GGTGCAACTA G
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| Protein sequence | MKTLGLSDVI GPIMVGPSSS HTAGALRIAY MARRLCLAEP KTVEFRLLGS FAHTLTGHGT
DKALVAGMLG LAADDLRIRD SFQLAGDAGL AFSFVTLPDA EYDHPNTIDM HIVDAAGNAM
SVRGESIGGG AAVIRKIDDI DVRITGESTS IVVRQRDETG VLAHIAQSIS DEGVNIATTR
MYRERKGDIA YTVLETDQEV DGAAKAAIED HPAILDVRVI PGDARPGCGS VDAPDAEEAL
QRFAEADFGT GAALLAWCEK HGTTLSEAFL AREAALAESL GYADRSLAYL HETLDVMKCA
AQRPIDEALP SMGGLIGGEA RKLADLRERD GELCDDQLSC AIAYAMAVLE TNASMGRIVA
APTAGSSGVL PGVLLALQRT RGLSDGDLAR GLAAAAAIGY LITRNATVSG AEGGCQAEIG
SAAAMAAAAS VELMGGAPAQ CLDAASNALT NMMGLVCDPI AGLVEEPCQK RNAAGAAVAL
VSAQIALAGI GNLVDFDQTV EAMRKVGRTL PFELRESALG GIAAAPTACA YCPGCN
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