| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0706 |
|---|
| Symbol | |
|---|
| ID | 8414996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 884265 |
|---|
| End bp | 886256 |
|---|
| Gene Length | 1992 bp |
|---|
| Protein Length | 663 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645023679 |
|---|
| Product | acetate/CoA ligase |
|---|
| Protein accession | YP_003181076 |
|---|
| Protein GI | 257790470 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCA ACACCCGCAA CGCCTTCGTC AGACAAATGC TCCAAAACGA AACGTCCATC
GAGCCCTCGC CCGAATTCAG CTACAACGCC CTCATCAAAA GCCGGCAGGA CTACGACGCC
ATGTACAGCC GTTCCATCGC CGATCCTGAG GCTTTTTGGG CCGATATGGC CACCGAGCAC
CTTGACTGGT TCAAACCGTG GGACGCCGTC GAGGAATACG ATTTCGATTC GGATGAGCCG
TTCGTGCGCT ACTTCCGCGG CGGGGAGCTT AACGCATCTT GCAACTGCAT CGATCGCCAC
CTGAACGGGC CGCGCAGGAA CAAAGCCGCG CTCATCTGGC AGGGCGAGCC CACCGAAGAA
GTGGACGTCT ACACTTACCA GCGTCTGCAT CGCGAGGTGT GCAAGGCGGC GAACATGCTC
CGCCGCCTCG GCGTGCGAAA GGGCGATCGC GTGGTGCTGT ACATGCCCAT GGTCCCCCAA
CTCGCGATCA GCATGCTGGC GTGCGCTCGC ATCGGCGCTA TCCACTGCGT GGTGTTCAGC
GGCCTGAGCG CCGAATCGCT GAAGGATCGC ATCGTCGACT CGGGTGCCAC GGTGGTCATC
ACGTCAAACT ACGGATACCG TTCGGGCAAG ATCCTGAGAC TCAAGGAAAT CTGCGATAAA
GCCCTTGACA TGTGCCCCCA GGTCGAGAGC TGCGTCGTCG TACGCCGCAT CGAGAAACGC
ACAGCCATGA AGGCGGGGCG CGATTTCTGG TGGGACGACG TGCTTGCTCC CGAGGCGCCC
CAATGCGAGC CGGAGCGGAT GGAAGCGAAC GATCCCCTGT TCATCCTCTA CACGAGCGGC
AGCACGGCGA AACCGAAGGG CATCCTGCAT GGCACCGGCG GCTATCTGCT TTACGCCACC
CTCACCTCGA AGTACGTGTT CGACCTCAAA GAGCATGACA TTTTCTGGTG CACGGCCGAC
GCCGGCTGGA TCACCGGTCA TTCCTACCTC GTGTACGGGC CGTTGTCGAA CGGAACGACG
TCGCTCATGT TCGAAGGCGT GCCCAACTTC CCCAAGCCCG ACCGTTTCTG GGAGATCGTT
GAGAAGTTCG GCGTCAACAT CCTGTACACG GCCCCGACCG CAGTGCGCTC CATGATGAAA
GACGGCGACC GCTGGGTGAA CGAGCACGAC ATCTCGACCT TGCGGCTGCT CGGCTCGGTA
GGCGAGCCCA TCACCTCGAA GGCTTGGATG TGGTACTACT CCACCGTCGG TCACAGCATG
TGCCCCATCG TCGACACGTG GTGGCAAACC GAGACGGGCG GCATCATGAT CACCTCGATA
CCCGGCGCAG TGGACATGAA GCCAGGATCG GCGGCGCTAC CGTTCTTCGG CATAGAACCG
AGGGTCATCG GAGCGGACGG AGCCGAGGCC GATGCCGGCG AGCGCGGGAG CCTCGTGCTG
ACGAGGCCAT GGCCGGGCAT GATGCTGGGC GTGTACGGCA ACGCGAAGGC TCACAAAGAC
GTGTACTTCC CCACCCCCGG CTACTACCTC ACGGGCGATG GCGCCTATCG AGACGAGGAT
GGCTACTTCT GGATCACGGG TCGCATCGAC GACGTGATGA ACGTGTCGGG CCACCGCATC
GGCACGGCCG AAGTCGAAAG CGCGCTCGTC TCGTACTCGC AGGTCGCAGA AGCAGCCGTC
GTAGGGTACC CGCATCCGGT GAAGGGCGAG GGCATCTATG CCTACATCAC CGTCAAAGAG
GGAACGGTCA TCGACGCCGA CCTGCGCGAC CGCCTGTTCG TGCACGTACG GGAGATCATC
GGGCCCATCG CCACGCCCGA TGTCATCCAT TTCGCCAACG CGCTGCCGAA AACGCGCAGC
GGTAAAATCA TGAGACGCAT CCTGCGGAAA ATCGCCGCGC AGGAGACGGA GGATCTGTGC
GACATCTCCA CGCTGTCCGA GCCTTCCGTG GTGCACGAAC TCATCCAAGA GACGAAGCGC
ATGAGCGCCT AG
|
|---|
| Protein sequence | MNRNTRNAFV RQMLQNETSI EPSPEFSYNA LIKSRQDYDA MYSRSIADPE AFWADMATEH
LDWFKPWDAV EEYDFDSDEP FVRYFRGGEL NASCNCIDRH LNGPRRNKAA LIWQGEPTEE
VDVYTYQRLH REVCKAANML RRLGVRKGDR VVLYMPMVPQ LAISMLACAR IGAIHCVVFS
GLSAESLKDR IVDSGATVVI TSNYGYRSGK ILRLKEICDK ALDMCPQVES CVVVRRIEKR
TAMKAGRDFW WDDVLAPEAP QCEPERMEAN DPLFILYTSG STAKPKGILH GTGGYLLYAT
LTSKYVFDLK EHDIFWCTAD AGWITGHSYL VYGPLSNGTT SLMFEGVPNF PKPDRFWEIV
EKFGVNILYT APTAVRSMMK DGDRWVNEHD ISTLRLLGSV GEPITSKAWM WYYSTVGHSM
CPIVDTWWQT ETGGIMITSI PGAVDMKPGS AALPFFGIEP RVIGADGAEA DAGERGSLVL
TRPWPGMMLG VYGNAKAHKD VYFPTPGYYL TGDGAYRDED GYFWITGRID DVMNVSGHRI
GTAEVESALV SYSQVAEAAV VGYPHPVKGE GIYAYITVKE GTVIDADLRD RLFVHVREII
GPIATPDVIH FANALPKTRS GKIMRRILRK IAAQETEDLC DISTLSEPSV VHELIQETKR
MSA
|
|---|
| |