Gene Elen_0506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0506 
Symbol 
ID8414790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp649428 
End bp650987 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content62% 
IMG OID645023477 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003180880 
Protein GI257790274 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.274884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACG AACGAGGATC GTCGCCGCTT GCGCTGGCGA TTCGCGAGGT GCCGGGAATC 
GCGATCGCTT CGATCGGCTT CGGATGCGCG CTGCTCGCCA TCGAAGGCGA CCGCCTCTCG
ACGATCAGAA CCGTCAATAT CAGCGGCGAC TACCACGCCG TCGCGTCGCT CGTATCGTTC
CTTCTCCTGA TCATGCTGGC TCTTGCGTAT CGCAAGCTGG ACGCGCCCAC CCACGTTCCC
GCCGCGATCG TCATCGGCGC AGGAGCGTTG ATGTCGGCTT CCATGTTCGT CGTCTTGCAG
CAAAGCGTAT GGGAGGACAA CCCCATCGTA TCCTCCATCG CGCGCATCGT ATTCGGGCTT
GGAGAGGGCG TCATCCTGTT TCTCTGGATG AAAGCGCTCT TTCCCTACGG GGCGCGCGCC
TGCGCCGCCG TGCTGGGCCT GGGAACGATC GTCGTTGCGG CAATGAACAG CCTCATCGCG
TTTCTGAAGG TGGATGCCGC TTACGGCACG GTATCGCTGC TCCCCATCGT GTCGATGGTG
CTGCTCTGCT ATTTCAGGGA ATACGCCCGT TCGCGCGCGC CGCGTGCGGA TCGCGACGAC
ATCCCGAGCG AGGATGCCTG CGCGAGCCCG GAGCGGAGCA TGGTGGCGGG AATCGGCTGC
CCCGATCGAT CCCTCATCGT CCCCTCGGAC CAGGCTCCTC GCGGTCGACG AGTATTCGTC
GTGACGATGA TGCTGTCGCT GGCTTGCTAT GCCGTGGTGT TCGGACATAT CCACTACCAA
TGGATTCCCC TGCAAGACGG CGGGACGGTA TCGCTCATCA TCCAGCTGGG CACGGCCGTG
GGCACCGCAT GCGGCGGAGC GGCCATCCTC GTGCTCGTCC AGTACTTCTG GAACAGGCGG
AGCCTCGAGC TGTACAAGGT GTTCCTCATA CCCACCGTGC TTCTTGCCTT GTGGCTGTCG
TCCTTCGTGA ACGAGACGTG GATATTCCTC TACCTCGTCT TGCTGAACAT CACGCAGAAG
CTGGTGTTCC TCTTTATCAT GCTGGCCCCC TTCCTCATCG AAAGCAAACG ACCCTACCTG
ATGCCCTGGT GCGTCGCGTT CCTCTCGTTC ACCGCGGGCA AAGCGGCGAG CTCTCTTCTA
TTGGAGCATA TGTCGCCCGA CGTATTCGTG TCCAGCTCGG TCATCGCGCT TGTCGTATTG
TTCGCCTGCG GAGCCATCAC GTCGCTTTCG GGAAGCATCA CCGACTACCA CACGCCAATC
CGCGGTCAAT GGCCCGGCCC TGACGCACCC GACGTTCACG ATGCGCTTCC CCACGCGAAC
AAGCTGCAGA ACGCGTGCCA TGCGCTCACC GACCAGTACC AGCTGACGGG GCGCGAGGAG
GAGATCCTCG TATTGCTGGC ACGCGGCCGC ACCGCGCAGC ATATCGCGGA CACGCTCGTC
ATCACGCAGT CCACCGCGAA GACCCACCTT CGCAACATCT ATGCGAAGAT GGACGTCCAC
AACCAGCAGG AGATCCTCAA TCTGGTCGAG CAGACCATCG ACGAGCAGAA GAAGGCATGA
 
Protein sequence
MTDERGSSPL ALAIREVPGI AIASIGFGCA LLAIEGDRLS TIRTVNISGD YHAVASLVSF 
LLLIMLALAY RKLDAPTHVP AAIVIGAGAL MSASMFVVLQ QSVWEDNPIV SSIARIVFGL
GEGVILFLWM KALFPYGARA CAAVLGLGTI VVAAMNSLIA FLKVDAAYGT VSLLPIVSMV
LLCYFREYAR SRAPRADRDD IPSEDACASP ERSMVAGIGC PDRSLIVPSD QAPRGRRVFV
VTMMLSLACY AVVFGHIHYQ WIPLQDGGTV SLIIQLGTAV GTACGGAAIL VLVQYFWNRR
SLELYKVFLI PTVLLALWLS SFVNETWIFL YLVLLNITQK LVFLFIMLAP FLIESKRPYL
MPWCVAFLSF TAGKAASSLL LEHMSPDVFV SSSVIALVVL FACGAITSLS GSITDYHTPI
RGQWPGPDAP DVHDALPHAN KLQNACHALT DQYQLTGREE EILVLLARGR TAQHIADTLV
ITQSTAKTHL RNIYAKMDVH NQQEILNLVE QTIDEQKKA