Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0406 |
Symbol | |
ID | 8414690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 520768 |
End bp | 522228 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645023381 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003180784 |
Protein GI | 257790178 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0269651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAAGCA AGCATGCAGG CATAGCCCTT GGGGCGCTCG GTTTCGGTCT GTGCAAGACC GCGATTTCGG TTGCCTACAT TACGGCGATG GGCTCGGTGT CCTCTACTGT CGGATTCGTG TCCGAGCTTG ATTTCATGTT CGCGATGAAC GCGATTTCGT TTGCGACGGC GCTTGCGATC ATCGCGCTCG TGCGCGCAGG ACGGCTTCGT CCGGGTGCGC TATCGCAAGT TCCGGCTGTG ATCGCGTTGC TCGTCGGGTT CTTTTTGAGC GCTACCGGCG TAATGGCGGG GCTGCCGTTC GCGGCGACGG CCGTGTTCTA CGGCGTGCTG TGCGGGTTCG CGCTCACGGT GCTCAATGCT GCATGGCTCG AGGCGTTCGT TGCGGAGCCC GATGCCGCTT ACGGCGTCTA CCAAATCGTG GGTGGGCTGA TCGTTCAATG CGTGCTGGTG TCGGTGCTAC CGCTTTTGGG GTCGCTTGCG GCAAGCGTGC TCTCCATTGT GGCGGTGGTC GTTTCGGCCT GCCTGCTCGT GCGACTCAAG CGCATGCTCT CGTTTGCCGA GCGCGACGAG CTTCTTCCGG CGAACCGCGG CGATCGCCTC TCGTTGCTGC AGGCGTTCTT ATGCCTGTTC GTGCTCGTGG GCGTTGTGGG CATCCTGCAC ACCACGGTAC TGGGCTCGCA GTCCGAGAGC ATCGTAGGCG ATGTGAACAT GTGGATGCCG CTGGTGGCGG CCACGGCGAT CACCGCGTTG GTGGCAGGGC TCACCATGCG ACATCCCGAT CCCACGGCCG TCTACAAGGG TTGTCTGCCC GCGATGCTGG CGATCCTCTC GTTGCTGCCG TTTTTCGGCG AAGCGCTCGG CGGGCTGGCC GGTCTCGTCA TGATCACGTG CTACGACGTG TGCGGCATGG TGTTCCTGCT GTTCATAGTC GATCGTGCAC GCACGTTGCG CATGTCGAGC TATGTGCTGT CAAGCGTGTA CCTGGGCGGC TCGGGTCTGT TCTTGGTGAT CGGCCTGTCC ATAGGCGGCG TTCTGGGCGC GCTCAGCGCC GATTACGGGC TGTCGTTGTT GACGCTGCTC GCGTTCGCGG CCATCTACCC GTTGGCCATC GTGCTGGTGG TCGCGTTGCG CCGCGCGCAT CCGCAAAGCG CTTCCCATGC TACGGCGAGC GAACGCGAGG CGGGTGCGCC AAGCGCGGGC TCCGTTCCTA CCGTCGATGA CGCGCTGGGT GCTGGCGTCG ATGCCGTTGC GGCGCGGTTC GAGCTGACGC CGCGCGAACG CGAGATATTG GGCTACTTAG CGCGCGGTCG CTCGGCCAGG TTCATCGCCG AGACGTTGAT CATTTCGGAG AACACCGTAT GGGCACACAT CAAGCGCGTC TACGCGAAAA CAGGCGTCCA TTCCAAGCAA GAGCTTATGA GCGTCGTCGA GCGACAAGGG AGAAACGGGA AAGACGGGTA G
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Protein sequence | MTSKHAGIAL GALGFGLCKT AISVAYITAM GSVSSTVGFV SELDFMFAMN AISFATALAI IALVRAGRLR PGALSQVPAV IALLVGFFLS ATGVMAGLPF AATAVFYGVL CGFALTVLNA AWLEAFVAEP DAAYGVYQIV GGLIVQCVLV SVLPLLGSLA ASVLSIVAVV VSACLLVRLK RMLSFAERDE LLPANRGDRL SLLQAFLCLF VLVGVVGILH TTVLGSQSES IVGDVNMWMP LVAATAITAL VAGLTMRHPD PTAVYKGCLP AMLAILSLLP FFGEALGGLA GLVMITCYDV CGMVFLLFIV DRARTLRMSS YVLSSVYLGG SGLFLVIGLS IGGVLGALSA DYGLSLLTLL AFAAIYPLAI VLVVALRRAH PQSASHATAS EREAGAPSAG SVPTVDDALG AGVDAVAARF ELTPREREIL GYLARGRSAR FIAETLIISE NTVWAHIKRV YAKTGVHSKQ ELMSVVERQG RNGKDG
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