Gene Elen_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0406 
Symbol 
ID8414690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp520768 
End bp522228 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content63% 
IMG OID645023381 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003180784 
Protein GI257790178 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0269651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAGCA AGCATGCAGG CATAGCCCTT GGGGCGCTCG GTTTCGGTCT GTGCAAGACC 
GCGATTTCGG TTGCCTACAT TACGGCGATG GGCTCGGTGT CCTCTACTGT CGGATTCGTG
TCCGAGCTTG ATTTCATGTT CGCGATGAAC GCGATTTCGT TTGCGACGGC GCTTGCGATC
ATCGCGCTCG TGCGCGCAGG ACGGCTTCGT CCGGGTGCGC TATCGCAAGT TCCGGCTGTG
ATCGCGTTGC TCGTCGGGTT CTTTTTGAGC GCTACCGGCG TAATGGCGGG GCTGCCGTTC
GCGGCGACGG CCGTGTTCTA CGGCGTGCTG TGCGGGTTCG CGCTCACGGT GCTCAATGCT
GCATGGCTCG AGGCGTTCGT TGCGGAGCCC GATGCCGCTT ACGGCGTCTA CCAAATCGTG
GGTGGGCTGA TCGTTCAATG CGTGCTGGTG TCGGTGCTAC CGCTTTTGGG GTCGCTTGCG
GCAAGCGTGC TCTCCATTGT GGCGGTGGTC GTTTCGGCCT GCCTGCTCGT GCGACTCAAG
CGCATGCTCT CGTTTGCCGA GCGCGACGAG CTTCTTCCGG CGAACCGCGG CGATCGCCTC
TCGTTGCTGC AGGCGTTCTT ATGCCTGTTC GTGCTCGTGG GCGTTGTGGG CATCCTGCAC
ACCACGGTAC TGGGCTCGCA GTCCGAGAGC ATCGTAGGCG ATGTGAACAT GTGGATGCCG
CTGGTGGCGG CCACGGCGAT CACCGCGTTG GTGGCAGGGC TCACCATGCG ACATCCCGAT
CCCACGGCCG TCTACAAGGG TTGTCTGCCC GCGATGCTGG CGATCCTCTC GTTGCTGCCG
TTTTTCGGCG AAGCGCTCGG CGGGCTGGCC GGTCTCGTCA TGATCACGTG CTACGACGTG
TGCGGCATGG TGTTCCTGCT GTTCATAGTC GATCGTGCAC GCACGTTGCG CATGTCGAGC
TATGTGCTGT CAAGCGTGTA CCTGGGCGGC TCGGGTCTGT TCTTGGTGAT CGGCCTGTCC
ATAGGCGGCG TTCTGGGCGC GCTCAGCGCC GATTACGGGC TGTCGTTGTT GACGCTGCTC
GCGTTCGCGG CCATCTACCC GTTGGCCATC GTGCTGGTGG TCGCGTTGCG CCGCGCGCAT
CCGCAAAGCG CTTCCCATGC TACGGCGAGC GAACGCGAGG CGGGTGCGCC AAGCGCGGGC
TCCGTTCCTA CCGTCGATGA CGCGCTGGGT GCTGGCGTCG ATGCCGTTGC GGCGCGGTTC
GAGCTGACGC CGCGCGAACG CGAGATATTG GGCTACTTAG CGCGCGGTCG CTCGGCCAGG
TTCATCGCCG AGACGTTGAT CATTTCGGAG AACACCGTAT GGGCACACAT CAAGCGCGTC
TACGCGAAAA CAGGCGTCCA TTCCAAGCAA GAGCTTATGA GCGTCGTCGA GCGACAAGGG
AGAAACGGGA AAGACGGGTA G
 
Protein sequence
MTSKHAGIAL GALGFGLCKT AISVAYITAM GSVSSTVGFV SELDFMFAMN AISFATALAI 
IALVRAGRLR PGALSQVPAV IALLVGFFLS ATGVMAGLPF AATAVFYGVL CGFALTVLNA
AWLEAFVAEP DAAYGVYQIV GGLIVQCVLV SVLPLLGSLA ASVLSIVAVV VSACLLVRLK
RMLSFAERDE LLPANRGDRL SLLQAFLCLF VLVGVVGILH TTVLGSQSES IVGDVNMWMP
LVAATAITAL VAGLTMRHPD PTAVYKGCLP AMLAILSLLP FFGEALGGLA GLVMITCYDV
CGMVFLLFIV DRARTLRMSS YVLSSVYLGG SGLFLVIGLS IGGVLGALSA DYGLSLLTLL
AFAAIYPLAI VLVVALRRAH PQSASHATAS EREAGAPSAG SVPTVDDALG AGVDAVAARF
ELTPREREIL GYLARGRSAR FIAETLIISE NTVWAHIKRV YAKTGVHSKQ ELMSVVERQG
RNGKDG