Gene Elen_0137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0137 
Symbol 
ID8414421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp189845 
End bp190558 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content60% 
IMG OID645023117 
Producttwo component transcriptional regulator, LytTR family 
Protein accessionYP_003180520 
Protein GI257789914 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGAAAG CGATGATCGT CGATGACGAG GCTCCTGCGC GTTCAGAGCT GAAGTTCCTG 
CTTGACGAGC TGGGGCAGAC GGAGGTTGTC GCCGAAGCTG CCAGTGTGCG CGAGGCTATC
GAGAAGTTGA AGGAATATCC GTGCGACGTG ATGTTCCTCG ACGTGAACAT GCCCGAAGCC
ACGGGCTTGC AGCTGGCTGA GGCGCTGCAG CACCTCAAGT TCCCGCCTGC GGTGGTGTTC
GTGACGGCGT ACAGCGAGTT CGCCCTCGAT GCGTTCAAGG TGAACGCCAT CGATTACCTG
GTGAAGCCGG TCGAAACCGA GCGCCTGTCG CAAGCTATCT CGCGCGTGCG CGAGCACGTG
TCGCTGCACG TGCAGGCTCA GAAGTCCGAG CGCATTCCCG TCGAAAAGGG CGGCAAGAAA
ATCCTCATCG GCATCGACAA GATCCGCTTC GTCATGGCGC GCGACGACTA CGCGTACCTG
CAAACGGATA CGGATCGTTA CTTCTCCACG GTCAGCTTGG CTCAGCTGGA GAAGCGCCTC
GACGGTCACG GTTTCTTCCG CGTGCACCGC GGCTATCTGG TGAATCTCTC GATGGTGGAG
GAGATCGAAT CGGTGTCGGG CGGTACGCTG CTGCTCACGC TGAACGCCGT GGACGAGAAA
ATTCCCGTGT CCCGTCGCCG AGTTTCCGCT TTGAAGAAGG CGCTGGGGCT GTAA
 
Protein sequence
MLKAMIVDDE APARSELKFL LDELGQTEVV AEAASVREAI EKLKEYPCDV MFLDVNMPEA 
TGLQLAEALQ HLKFPPAVVF VTAYSEFALD AFKVNAIDYL VKPVETERLS QAISRVREHV
SLHVQAQKSE RIPVEKGGKK ILIGIDKIRF VMARDDYAYL QTDTDRYFST VSLAQLEKRL
DGHGFFRVHR GYLVNLSMVE EIESVSGGTL LLTLNAVDEK IPVSRRRVSA LKKALGL