Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0123 |
Symbol | |
ID | 8414406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 164968 |
End bp | 166446 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645023102 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003180506 |
Protein GI | 257789900 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.891774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTTT CGCGCTTCGA CAAGCGCCGT CTGTTCGTCG CGTGCTGCGC GCTTGGATTC GCCTCGTTCA AAGTCGCCCA GTCGTCCCTA TACTCCACGG CCATGCTGAC GTCGGAAACG ACCACCGTCC TCATAGCGGG ATTGGACTTC AGCATCGCGT CGGCGGCTTT CGTCGTCCTC ACGGAAGCGG TCATCGTCGC GCTGGCCCTG CTTGGTCGGC TGCCCAGGCT ATCCATGCCA GTGATCGCGC CCTCGTTGGT GCTGGCGGCC ACCGCGGTGT TGTCGTACAG CGGCGCTCTC TCGTCCGTCG ATCCAGTAGT CTCGCTGATG GCGCTTGCTT TCGCGCAGGG AACCGCCACG GTCATGCTCA CGTTGGCTTG GGTAGAAATC ATGACGGAAA TGGAGCCCAC CATCAGCATG AAGACGCTGG CCTCGTCGAT GCTGCTGGCC GCCGCGGTCA CTTTGGCCTT GCAGAACAGC CCTTCGCTGG TCATGCTTCC CTGCGTCGTT GCGACGCTAG TGGCGAGCGC ACTGCTCTAT CGACGCGCGA AAGGCATAGC GGGCAACGCG CTTGCCAGCG GCAAGACGAT GGGAGGCGAC GAGGCGGCGG CGGGTGCGGA GCAGAAGAGG GATCGAACCT CCCTGCGACC GTACCTTCGG GGATTCGTGT CCATCGGGGA AGGCCTGCTG TCGCTGCTGG TGCTCGGATG CGTCGTGGGC ATCATCAACG GATTCATGGT GGTGCAGCAC TACGACTTCG ACGGCTCGTC TTTGGCATCG GCGATGGGCA TCGCCGCAGC CTCGATGGCG TTCTTCGTCA TGGCGTACGG CTTTCCGAAG ACGTTCAGCG CCTCCCGCGC CTATCGCGCG CTCTTCCCCC TGCTCACCGG CGTGCTGATC ATTTGGCCGT TCGCGAACTT CCAGTACAGC TACTTCGTGG GCGCGGCGTT CGTCGCCGGC CACAGCCTGA TCTCCACCAG CGTGATGTAC CTCATCATTC GCGAAGCGCA CGAAAGCGAT TTGAACCCGT ATGCGTTCAT GGGTGCGTCG GTGCTGCTGA TCAGGCTTGC ATCGGTGTCG GGGATCGTAG GCGGCACGGT TATCGCGGGG CTCGATCTCA ACCCGTCGTT CAAGACGATG CTGGTGTTCT GCATCGCGTT GTACCTGCTT TCCATCGTCC TGCTATTCAT GCTGCGCATC AGGAAGCGCT CGGAACGCGA GCAACGGCCG GCCGCGTCCG GCGAGCCCGT CCGAGGCGAA GACGCATTCG ACGCCAAAGG CACCGAAGTG ACGGTTCGGC ATGGCCTGAC GGACCGCGAA TCGGAAATCC TCCTGCTGCT GGCTCGCGGC AGGAGCTCCA CCTATATCGG CGAGGCTCTG TACCTGTCTC CCAACACCGT GCGAGGACAT ATCAAGAACA TCTACGCGAA GCTGGGCGTA CACTCCAAGC AGGAGATAAT CGATCTGTTC ACCGCTTGA
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Protein sequence | MDVSRFDKRR LFVACCALGF ASFKVAQSSL YSTAMLTSET TTVLIAGLDF SIASAAFVVL TEAVIVALAL LGRLPRLSMP VIAPSLVLAA TAVLSYSGAL SSVDPVVSLM ALAFAQGTAT VMLTLAWVEI MTEMEPTISM KTLASSMLLA AAVTLALQNS PSLVMLPCVV ATLVASALLY RRAKGIAGNA LASGKTMGGD EAAAGAEQKR DRTSLRPYLR GFVSIGEGLL SLLVLGCVVG IINGFMVVQH YDFDGSSLAS AMGIAAASMA FFVMAYGFPK TFSASRAYRA LFPLLTGVLI IWPFANFQYS YFVGAAFVAG HSLISTSVMY LIIREAHESD LNPYAFMGAS VLLIRLASVS GIVGGTVIAG LDLNPSFKTM LVFCIALYLL SIVLLFMLRI RKRSEREQRP AASGEPVRGE DAFDAKGTEV TVRHGLTDRE SEILLLLARG RSSTYIGEAL YLSPNTVRGH IKNIYAKLGV HSKQEIIDLF TA
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