Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0097 |
Symbol | |
ID | 8414380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 127804 |
End bp | 128877 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645023076 |
Product | twitching motility protein |
Protein accession | YP_003180480 |
Protein GI | 257789874 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.767539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTGG AGCAGCTCTT GCAAGAGATG GTGGACGCGA AGGCATCCGA CGTCTTCATT ATCGCAGGAC TTCCTTTGGC GTACAGCGTG AGCGGCCGCC AGGTTCGACT GGATTCGGCA CCGTTCAAGC CGGCCGACAC CGAGGCCTTC GTCGGAGCCA TCTACGAGGC ATCTGGCCGC AACATGGACA CCTTCATGCA GAACGGCAAT CACGACGACG ACTTCTCGTT CGCCCTGCCC GGCATCGGGC GCTTCCGCGC GAACGTCTTC CGTCAGCGCG GTTCGTACGG AGCGGTCATC CGCGTCATCC CCTTCGGCCT GCCCGATCCG GCGGAATTCC ACATCCCCGA CGAGGTGCTG CGCCTGGCCA AGTTCCAGAA GGGGCTCGTG CTGGTCACCG GCCCGGCGGG CGCCGGCAAG TCCACGACGC TGGCATGCAT CATCGACCGC TTGAACCATG AACGTTCCGG CCACATCATC ACGATGGAAG ACCCCATCGA GTACGTGCAC AAGCACGGCA CCTGCATCGT CACGCAGCGC GAAGTGCCCA CCGACGTGGC AACGTACAGC GAGGCCCTGC GCTCGGCCAT GCGCGAGAGC CCTGACGTCA TCCTGCTGGG CGAGATGCGC GACCAGGACA CCATCGGCAC TGCGGTGACT GCGGCCGAGA TGGCGCAGCT GCTGTTCTCT ACGCTGCACA CTACGGGCGC CGCGGGCACG GTGGATCGCA TCATCGACGC CTTCCCCGCT TCGCAGCAGC GCCAAATCCG CATTCAGCTG TCCATGGTGC TGCAGGCAAT CGTGTCGCAG CAGCTTGTGC CCACCGTCGA CGGCGGCACG GCGCCGGCCT TCGAGATCAT GATCACGAAC ACAGCAATCC GCAACCTTAT TCGCGAGGAG AAGACGCATC AGCTGGACAG CGCCATCGCC TCGGGCGGTG CCGAGGGCAT GCGCACGATG GATCAGAGCT TGTTCGATCT CGTGAAGAGC GGACGCGTAG CAAAAGAGAT GGCGCTGCAG TACAGCATCC ATCAAGAGGC GCTTGAGAAG CGCTTCGAAA CAGAAGGCCT GTAG
|
Protein sequence | MKLEQLLQEM VDAKASDVFI IAGLPLAYSV SGRQVRLDSA PFKPADTEAF VGAIYEASGR NMDTFMQNGN HDDDFSFALP GIGRFRANVF RQRGSYGAVI RVIPFGLPDP AEFHIPDEVL RLAKFQKGLV LVTGPAGAGK STTLACIIDR LNHERSGHII TMEDPIEYVH KHGTCIVTQR EVPTDVATYS EALRSAMRES PDVILLGEMR DQDTIGTAVT AAEMAQLLFS TLHTTGAAGT VDRIIDAFPA SQQRQIRIQL SMVLQAIVSQ QLVPTVDGGT APAFEIMITN TAIRNLIREE KTHQLDSAIA SGGAEGMRTM DQSLFDLVKS GRVAKEMALQ YSIHQEALEK RFETEGL
|
| |