Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0087 |
Symbol | |
ID | 8414369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 116600 |
End bp | 117514 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645023065 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003180470 |
Protein GI | 257789864 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGT TTCGTATGGA TGTCGATCAG AAAAGGTATT TTTGCACGCT GTGCTCGGAG GGCAGCATCA CTCGAGCCGC GCAGTCGCTT TACCTTTCGC GGCAAGGTTT GTCGAAGAGC ATGAAGAGCC TCGAAAGCCA ACTAGGCGCG CAGCTTTTCG TCCGTGGCAA GAAGGGCGTC GAGCTGACGG CGGCGGGCAG GATCCTTCTC CGTTATCTGC ACGAAGAGGG TCGGCTGTGG GATGCGTGCG TTGCCGATAT CCGTTCGGTT AGCCAAACGG ATTCCGAGCT GGTGCGCGTG GGTTTGCTCA GCATGTACGT GGGGTACAGC CAGAAGCGAG GGTTGCTGGC GAGCTTCCAA GATGATCCGC GCGTAAAGAT CGAAGTGGTC GACGGCGACC ATGATGCATT CTGGAAAGCT ATAGCGGAAG GGGAGCTGGA GCTTGCGTTT TCCATAAAGC CTCCTGATGA TTTGGGATTG CCCTCAATAA AGCTATGCGA CGACGGTTTG TCGGTCTTGC TGTCGGCCAG CGACCCGTTG TCGCGCAAGA GGTTCATCGA CTTCGAGACT GATTTGAGGG GGAAGACGGT CATCCAGACG AGCCCTTGCA AAGGCAGGCT GTACGAGGCG ACGTTTCGAA AATACGGCAT CAACATGACG TTGCTTATGC ATGACAAGAA CCTTATGTTG GCTCAGGTTT CAATCAGCAA AGGCTGCTTT ATTATTCAAA CCGAGTACGC AAAAATGCTG GTCACCGATC AGGTTTGCAT GAGACCGCTG ATCAATGCGC CCATCGAGAT GGACTCTATG CTGGTGTTCG CCCCTGCGCT ACGCCCTATG GCGCGTGCGG TGGCGCGTCA TCTGCTAGCG CCGTACGGCA AGGAAAGCGA ACTCGATGCG TATTTTGGCA TATAA
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Protein sequence | MAKFRMDVDQ KRYFCTLCSE GSITRAAQSL YLSRQGLSKS MKSLESQLGA QLFVRGKKGV ELTAAGRILL RYLHEEGRLW DACVADIRSV SQTDSELVRV GLLSMYVGYS QKRGLLASFQ DDPRVKIEVV DGDHDAFWKA IAEGELELAF SIKPPDDLGL PSIKLCDDGL SVLLSASDPL SRKRFIDFET DLRGKTVIQT SPCKGRLYEA TFRKYGINMT LLMHDKNLML AQVSISKGCF IIQTEYAKML VTDQVCMRPL INAPIEMDSM LVFAPALRPM ARAVARHLLA PYGKESELDA YFGI
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