Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_0086 |
Symbol | |
ID | 8414368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | - |
Start bp | 114741 |
End bp | 116288 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645023064 |
Product | fumarate reductase/succinate dehydrogenase flavoprotein domain protein |
Protein accession | YP_003180469 |
Protein GI | 257789863 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01813] flavocytochrome c |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAAATC TGACACGCAG GGACCTTTTG AAGGGCTTGG GGTTGGGATC GGTCGTGCTT GCCTCGGGAG GCGCGCTCGC CGCTTGCTCG CCCAACGAGA ACGAGACCGG GGGCGCAGCA AAAACCTCGT CGCAAGGTAG CAGCTATCAA TTCGCTAAGC GCAAGAGCGA CATCGCCGGC ATGACGCAAA CCGAAACCGA CGTGCTGGTC ATCGGCGGAG GCGGAGCGGG CCTGTGCGCC GCGCTCAGCG CTGCCGAGCA AGGCGCGCAA GTGACATTGT GCGAGAAGAC AAGCGTTCTG GGCGGAGCCA CCATGCTTTC AAGCGGCAAG ATTCCCGCCG TAGGCACTCA GCAGCAAATG GACATGGGCG AAAACGACAG CGTGGACGCA TGCGTTATGG ACATCATGCG TCCGAACAAC TACAGCGTTC GACCCGACCT AGTGCGCACC GTGACCGAAC AATCAAAAGA CATCGTCGAG TGGACCGAGA AGCACGGCGC GGTGTGGACC ATCGACCAAG CGCTGTATTA CGGTCAGACT GCGCACCGCA TGCATACCAC CGCCGATGCC GGCAAGGGAC TGACCGATGC GCTCGTCGCA AGCATGAGCG CCAACGACGC AATCACGCAG ATGCTGTCAT GCGAAATGCA GGGACTGGTG CTCGCGGACG ATAGCGACGA CGTCGTAGGC GCTTACGGCA AAATGGGCAA GGACGAGCTG GCCATCCTGG CAAAGAACAC CGTCCTTGCA TCGAGCGGGT TCGCCAACAA CCCCGACATG CTGGCGCAAT ACTGCCCCGA GGCCGTTGAT GCTTTCAAAA TGGTGGCGCC AGGAGCTACC GGCGAAGGCA TCCTCTGGGC GCAAGAGCTG GGCGCGAACC TCCAGAACAT GGGCGCTTAC CAAGGCCATG CGTTTCACGG AGTAGACAAC GGCAAAACGC TTGAACAAGG CATTGCGAAC AACGGCGGCA TCATGGTGAA CCAAGAAGGC AACCGCTTCG CCAACGAATA CACCGGCTAT TCCGAACTGT CCCCTCATGT CATAGCGCAA TCCGACAACA TCGCCTACCT ATGCTTCACC GACGCGCAGG TAGCGAAGAG CGCGAAATAC GCTGAGTGGG AAGCGGAGGG CATCGTAATG AAAGGTGCAT CCAGTGCCGA GCTGGCCGCC GCCATCGGGA CGGACGCCGC GACGCTGGAA AAGACGATCA CAGAGTATCA GGCCGCCATC GAAAAGGGCG AGGATAAATT CAACCGATCC CATCTGCCGG AAAGCTTCGA TGGCCCGTAT TACGCAGTGA AGGTTACAGG CGAGATTCGC CATACGCAGG GCGGCATGGC AACCGATCTA GCAGGTCACG TGCTGCGCGC AGACAAGAGC CTGATCAAGG GATTATATGC AGCTGGCGGC TGCACCGAAG GATTCTCCTC ACGCGGAGGT GCAGCCTACA TGAGCGGCAA CGGCCTCATT CAGGCACTCG TCTTCGGCAA GATAGCCGGA GCCGCCGCCG CAACTGAAAG CCCCGAGAGC GCAACCATCG TGGAATGA
|
Protein sequence | MGNLTRRDLL KGLGLGSVVL ASGGALAACS PNENETGGAA KTSSQGSSYQ FAKRKSDIAG MTQTETDVLV IGGGGAGLCA ALSAAEQGAQ VTLCEKTSVL GGATMLSSGK IPAVGTQQQM DMGENDSVDA CVMDIMRPNN YSVRPDLVRT VTEQSKDIVE WTEKHGAVWT IDQALYYGQT AHRMHTTADA GKGLTDALVA SMSANDAITQ MLSCEMQGLV LADDSDDVVG AYGKMGKDEL AILAKNTVLA SSGFANNPDM LAQYCPEAVD AFKMVAPGAT GEGILWAQEL GANLQNMGAY QGHAFHGVDN GKTLEQGIAN NGGIMVNQEG NRFANEYTGY SELSPHVIAQ SDNIAYLCFT DAQVAKSAKY AEWEAEGIVM KGASSAELAA AIGTDAATLE KTITEYQAAI EKGEDKFNRS HLPESFDGPY YAVKVTGEIR HTQGGMATDL AGHVLRADKS LIKGLYAAGG CTEGFSSRGG AAYMSGNGLI QALVFGKIAG AAAATESPES ATIVE
|
| |