Gene Elen_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0072 
Symbol 
ID8414352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp97589 
End bp99022 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content66% 
IMG OID645023048 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003180455 
Protein GI257789849 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.323936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGC ACGCATCTGA CAAAACGCGA ATCCTCGCCC TCGCGGCGGT GGCCACGCTC 
GGGTTCGGCC TGCTGCAGGG CGCGCGGCTG CTCGACCTCA ACACGGGGCC CTACAGCCCC
AGCCCCTACG CCCTGGTAGG CCTCGCGGCC GACGGGCTCA CGTTCCTCGT CGTCGCCGTC
CTCTCCTACC TCGGGCGCAT CGACCGGGCG AAGCCGCTGT TCGTCGCGGC CGTCGTCGTC
AGCTCGATCT ACGCCGTGCT CGTTGCGTCG GGCAACACAA ACGATATCGC GCTTATCGCC
ATGCAGGTGA CGGCGGGCAT GGGCTGGTCG CTGTCCATCC TCTGCTGGAT GGAAGTGTTC
ACCAGCTACC GGCCGCGGCT CTCGCTTCCC CTGATCGCCG TCGCGTACCT CATTGATACG
CTGCTTCCGC CGCTGACCAG TTCGCTGTTC CCAGGCGGGC GCAGCATCAT GCTGCTGGCG
TCGTTCGTCC TGTCCACCGC CGCGCTGCTG TGGTGCCTGC GCAACAACGC GTTCGTCGCC
CAGCAGATGA AGGAATCCGT CGCACCCGCA ACCTCCATGG CCGAGGCGCT TTCGCGCACG
AAGCGCGCGG TCGCAGGGAC GTTCGCGTTC TCGCTGATCT GCGGGTTCGT GATAGAGCTC
GACATCCACA ACAACCTGCA GTACGCGCAG ACCGACCTCA CCGGCCTGTT CGGGATCATC
GCGGCCGTGG CCATGCTGGC CGTGCTGCTG GTGGCGAAGC CGCGCAAGGC GAACATCGAC
TACATCACGC CCATCACCGC GTTGTGCCTG GTCACCATCT TGCTGTACCG CAGCCTCAAC
GTCGCCGACG GGCACGTGGC CGGATCGCTG ATGACCGCGT TCCTCATCTC GTTCTACGTG
CTGCTGTGGC TCATGTTCAT CAGCGAGGCG AACGAGCGGA AGCTGCCGGC GTTCTTCCTG
CTGGGCTTGG CCTTGGGCGT CGCGAGGCTG TCGGTGGCGC TGGGGCGCTT CGCGGCGCAG
ACGCTGTTGG AGCAAACCGG CGTCGATCCG CAGCTCGCGC TCGTCGGCTC GGTGTGGCTG
CTGGTGGCCA CGCTGGCGCT CATGTTCTGC AGCTACCTTC GCTATGCGTC GAAGCGGGAT
GCGGTCGGCG ATGCGAGCGC CCCCGAGGAA GCGGCGGCCG TCCCGCTGGC GCACCTGTCG
GCAGGCGATG CGCTCGTGCA GATGAAGGGC ACCTACGAGC TGACGAACCG CGAGTTCGAA
GTGATCGAGG AGTTTGCGGC GGGACGCAGC GCCCGGGCCA TCGCCGAGCG TTTCACGCTG
TCGGAGCACA CGGTGAAAAC CCACCTGCGC CACGCTTACG CGAAGATGGA CGTGCACTCG
CGCCAGGAAT TGCTCGACCT CATAGAGGAG ACGAGCGCCG CCAAGAAGAG TTAG
 
Protein sequence
MNAHASDKTR ILALAAVATL GFGLLQGARL LDLNTGPYSP SPYALVGLAA DGLTFLVVAV 
LSYLGRIDRA KPLFVAAVVV SSIYAVLVAS GNTNDIALIA MQVTAGMGWS LSILCWMEVF
TSYRPRLSLP LIAVAYLIDT LLPPLTSSLF PGGRSIMLLA SFVLSTAALL WCLRNNAFVA
QQMKESVAPA TSMAEALSRT KRAVAGTFAF SLICGFVIEL DIHNNLQYAQ TDLTGLFGII
AAVAMLAVLL VAKPRKANID YITPITALCL VTILLYRSLN VADGHVAGSL MTAFLISFYV
LLWLMFISEA NERKLPAFFL LGLALGVARL SVALGRFAAQ TLLEQTGVDP QLALVGSVWL
LVATLALMFC SYLRYASKRD AVGDASAPEE AAAVPLAHLS AGDALVQMKG TYELTNREFE
VIEEFAAGRS ARAIAERFTL SEHTVKTHLR HAYAKMDVHS RQELLDLIEE TSAAKKS