Gene Elen_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0046 
Symbol 
ID8414325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp60130 
End bp61023 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content67% 
IMG OID645023021 
Productpeptidase A24A domain protein 
Protein accessionYP_003180429 
Protein GI257789823 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.967031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTC CCCTTGGCAT CTTCAATCCG GCGCAGGCGG CGTTCCTTCT GGGGGTCGCC 
GCCGTGCTGG GTGCTTGCCT GGGGAGTTTC GTGAACTGCC TGGCATGGCG GCTGGCCAAC
GGCGAGAGCG TGTTGGCCGG CCGCAGCCAT TGCACGTCGT GCGGCCACGT ACTGGGAGCG
TTGGACCTCG TCCCTGTGGC ATCGTGGCTC GCGCTTCGCG GCCGCTGCCG CCACTGCGGG
CAGCGGGTGA GCCCGCGCTA CGTCATCGTG GAAGCGCTCG TGGCCGCGTT GTTCGCTGCC
GTCGTCGCGC GCTACGGATT GTCGGTGCAA ACGGCCGCCT ACCTGGTGCT CGTGTGCATC
CTCATGGCTG TGGCGTTGGT GGACCTGGAC ACGTTCATCA TTCCGAACGG GTTTGTGGTG
GCGGGCTGCG TGCTGTGGCT GGTGTCCATC TGGTTCATGC CCGCACCGCG CGTGGACGCG
TTCTCGGTGG GCAGCCTGTT CTCGGGTTGG GTGCATCCGG GCGGCGCGGT GGCGCTGGAC
GGCATCGTAG GCGCGGCGGT CGTCGCGGGC GGCGTGCTGG TATTGTCCGT GGCGTTCGAC
AAGGTGACGA AACGCCGGTC GCTCGGCGGC GGCGACGTCA AACTGCTGTT CATGGTGGGG
TTGTTCCTCG GGTTGGCGGG TTCTATGCTG AATCTGCTGA TGGCGTGCCT TATGGGGTTG
GCGTTCGCGT TTGCTCAGGG GTTTTCCGTA CCTTCTTCGC CGGGCGAGGG CGAAGGCGAG
GGGGAAAGCG TCCGAACAAG GGCGATTCCG TTCGGGCCGG CCATTGCCGC GGCCACGGCG
TTCACGCTGT TGGCGGGGCC GACCATCCTC ACGTGGTACG CGGGGTTGTT CTGA
 
Protein sequence
MTIPLGIFNP AQAAFLLGVA AVLGACLGSF VNCLAWRLAN GESVLAGRSH CTSCGHVLGA 
LDLVPVASWL ALRGRCRHCG QRVSPRYVIV EALVAALFAA VVARYGLSVQ TAAYLVLVCI
LMAVALVDLD TFIIPNGFVV AGCVLWLVSI WFMPAPRVDA FSVGSLFSGW VHPGGAVALD
GIVGAAVVAG GVLVLSVAFD KVTKRRSLGG GDVKLLFMVG LFLGLAGSML NLLMACLMGL
AFAFAQGFSV PSSPGEGEGE GESVRTRAIP FGPAIAAATA FTLLAGPTIL TWYAGLF