Gene Elen_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0045 
Symbol 
ID8414324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp59734 
End bp60126 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content59% 
IMG OID645023020 
Productpilin like competence factor 
Protein accessionYP_003180428 
Protein GI257789822 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4970] Tfp pilus assembly protein FimT 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGA TGATCAAGAA GATGCGCGAA GAGCGCGGCG GCTTCACGCT GGCCGAGCTG 
CTGGTCGTCG TGGCCATCGT GGCCGTGCTG GTGGCCATCG CCGTGCCGCT GTTCTCCAGC
TCGCTCACCA GCGCCGAGGA AGCCGTGAAG AAGGCGAACG AGCGCTCGGT GAAGGCCGAA
GTGACGACGG GTTACCTCGC CGACGGCTTT GACAAGACCA AGTATAACAA CATGTATTAT
AGCGCTAACG ACAAGGGCGA CCTGACCGGT CCGGCAAGCG CAGCTTCTGA AGGCGCCAAG
TATGTGTACA AGGTGACGAT CGATGATTCC ACCGATAAAA CTAAGCCGAC GATCACGGTC
ACGGACGTGA CTGACGGCGA GCCCACTAAC TAA
 
Protein sequence
MKEMIKKMRE ERGGFTLAEL LVVVAIVAVL VAIAVPLFSS SLTSAEEAVK KANERSVKAE 
VTTGYLADGF DKTKYNNMYY SANDKGDLTG PASAASEGAK YVYKVTIDDS TDKTKPTITV
TDVTDGEPTN