Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1347 |
Symbol | |
ID | 8414236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1518313 |
End bp | 1519209 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645022948 |
Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Protein accession | YP_003180362 |
Protein GI | 257785145 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.287874 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGGAG CTGAGCTTCG TCCCGATTCG CACGGTAAGG TTCGCGATAT TTACGATTGC GGCGACAAAC TTTTAATGGT TGCGAGCGAT CGCATTAGTG CTTTTGACTT TATTCTCCCT GATGAGATTC CTTTTAAGGG AGAAATTTTG ACACGTATTA GCGCATTTTG GTTTAATCGC TTTAAGGATC TTTTACCTAA CCATATGATT TCTGTTTTGC CAGACCAGAC TCCTGAGCAG TTTGCAGATT ACACTGAGTA TCTTGCAGGC CGCGCTATGT TGGTTAAAAA GGCAAAAACT GTGCCAATTG AGTGCATCGT ACGAGGTTAC CTTACTGGTT CTGGTAAGAA GACTTACGAC CAGGACGGTA CTGTCTGTGG CATTAAGTTG CCTGATGGTC TAAGCGAGGC CTCAAAGCTT CCTGAGCCAA TCTTTACACC TTCTACTAAG GCTGAGCTTG GTGATCATGA CGAGAATATC TCGTTTGAGC GTTGCTGTGA GATTGTTGGT GAGGATGTTG CAACTCAGTT GAAGGAAGCC TCGCTTGCAA TTTATAAGGC TGCTGCAGAA TATGCCGCAA CTCGTGGAAT TATTATTGCG GATACCAAAT TTGAGTTTGG TTTTATCGAC GGAAAACTTA CACTTATTGA TGAGTGCCTT ACACCCGATT CAAGCCGTTT TTGGCCTGCT GAGGGATATA TTGAGGGACA TGTTCAGCCA AGTTATGATA AACAGTATGT ACGGGATTGG CTGAAAGCCT ACTGGGACAT GCAAGGAGAG CCACCTCATC TGCCAGAAGA GGTAATTGAG GGCACGTCCG AACGTTATCG TACGGCATTC CAGATTATTA CGGGAACTGA GTTTGTACCA CTGAAGGAGA CCAATGTCAC TGCGTGA
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Protein sequence | MAGAELRPDS HGKVRDIYDC GDKLLMVASD RISAFDFILP DEIPFKGEIL TRISAFWFNR FKDLLPNHMI SVLPDQTPEQ FADYTEYLAG RAMLVKKAKT VPIECIVRGY LTGSGKKTYD QDGTVCGIKL PDGLSEASKL PEPIFTPSTK AELGDHDENI SFERCCEIVG EDVATQLKEA SLAIYKAAAE YAATRGIIIA DTKFEFGFID GKLTLIDECL TPDSSRFWPA EGYIEGHVQP SYDKQYVRDW LKAYWDMQGE PPHLPEEVIE GTSERYRTAF QIITGTEFVP LKETNVTA
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