Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1342 |
Symbol | |
ID | 8414230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 1510364 |
End bp | 1510777 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 645022942 |
Product | FHA domain containing protein |
Protein accession | YP_003180357 |
Protein GI | 257785140 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1716] FOG: FHA domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0061803 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTGACT TGATTCTCTT TGCAGGACGC GTTCTGCTTG TTGTCCTGCT TTACATCTTC TTATTCTCAG TCATGCGCAC AGGTATTGGT CTTGTCCGTG GACAACGCAA AGACGGAGCT ATTTGGTCCG TTGATGTCGA GAAGGGCGTC AAGTCCTTAC GCGGCCTTCA TGTTGACATC TTAGGTCCCG TTGTCATTGG ACGCTCTCCT TCTTCTGACA TCGTGATTGA CGAACCTTAC GTTTCTGCTT CACACGCTCG CTTTACAATC CAGGGCCCTG CTCTGGTGCT TGAAGACCTT GGATCCACAA ATGGAACCAT GGTTAATGGT CACATCATCG AACAACCTGT TACCCTTCGT GATACAGATG AAGTTCAGGT CGGCGATGTG ATTATGCGTG TTGGACGTCG ATAA
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Protein sequence | MIDLILFAGR VLLVVLLYIF LFSVMRTGIG LVRGQRKDGA IWSVDVEKGV KSLRGLHVDI LGPVVIGRSP SSDIVIDEPY VSASHARFTI QGPALVLEDL GSTNGTMVNG HIIEQPVTLR DTDEVQVGDV IMRVGRR
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