Gene Apar_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1342 
Symbol 
ID8414230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1510364 
End bp1510777 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content48% 
IMG OID645022942 
ProductFHA domain containing protein 
Protein accessionYP_003180357 
Protein GI257785140 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0061803 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGACT TGATTCTCTT TGCAGGACGC GTTCTGCTTG TTGTCCTGCT TTACATCTTC 
TTATTCTCAG TCATGCGCAC AGGTATTGGT CTTGTCCGTG GACAACGCAA AGACGGAGCT
ATTTGGTCCG TTGATGTCGA GAAGGGCGTC AAGTCCTTAC GCGGCCTTCA TGTTGACATC
TTAGGTCCCG TTGTCATTGG ACGCTCTCCT TCTTCTGACA TCGTGATTGA CGAACCTTAC
GTTTCTGCTT CACACGCTCG CTTTACAATC CAGGGCCCTG CTCTGGTGCT TGAAGACCTT
GGATCCACAA ATGGAACCAT GGTTAATGGT CACATCATCG AACAACCTGT TACCCTTCGT
GATACAGATG AAGTTCAGGT CGGCGATGTG ATTATGCGTG TTGGACGTCG ATAA
 
Protein sequence
MIDLILFAGR VLLVVLLYIF LFSVMRTGIG LVRGQRKDGA IWSVDVEKGV KSLRGLHVDI 
LGPVVIGRSP SSDIVIDEPY VSASHARFTI QGPALVLEDL GSTNGTMVNG HIIEQPVTLR
DTDEVQVGDV IMRVGRR