Gene Apar_1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1326 
Symbol 
ID8414211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1489348 
End bp1490094 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content46% 
IMG OID645022923 
ProductCobB/CobQ domain protein glutamine amidotransferase 
Protein accessionYP_003180341 
Protein GI257785124 
COG category[R] General function prediction only 
COG ID[COG3442] Predicted glutamine amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.36393e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000591695 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTAATC CAGCAACTAA GATTGAGATT CTTTATCCAG AGTATGGCAA CCAGGGTGGA 
GATAACGGAA ATGCTCTCTA CCTGGAGGCT TGTCTCCCAA AAGAGAACTT TGTGTATACC
TCTCATGCCG CGACGCCTTA CTTTGTGGAA CATACACCGT CAGCAATCAT CATGGGTGGC
ATGACAGAGG CTCAGCAAGA GCTTATTATT TCTCGCCTCA TGCCTTACAA GGATAGACTG
GCTGAACTGG CTGATCAGGG CGTCCCTATG CTGTTTACCG GTAACGCTTC AGAGCTTTTT
GGCGAGAAAA TCGTTAATCC AGACGGCTCT GAAATTAAAG GCTTGGGTTT GTTCAAATTC
ACGACTACTC GTTATATGCC TCAGCGCTTC CACGACGTTC AGGTGGGAGA GTTTGATCCC
GGCAACGGCA AAGAGCCTTT TACTGTTGTT GGCTTTAAGA TGCAGTTCAC GCTTACTGAG
GGAGATAACT CCAACTGCCA TTTTCTTAAA AATAAGGTAG GTTTTGGCAT CAATAAAGAA
AGCAAGTTGG AAGGTTTCCG ACGCAAGAAC GCTATTGCCA CCTGGCTTAT TGGTCCGCTG
CTTCCACTCA ACCCTTACCT CACACGTTGG ATTTTGGATA TGGCGGGTGA AAAAGACACT
CCTCTTGCCT TTGAAGAAGA GGCTATTGCT GCATATCAAA AGCATGCTCG CGAGATGGTC
TATCCAGGAA TGCATTTGCA TTACTAG
 
Protein sequence
MSNPATKIEI LYPEYGNQGG DNGNALYLEA CLPKENFVYT SHAATPYFVE HTPSAIIMGG 
MTEAQQELII SRLMPYKDRL AELADQGVPM LFTGNASELF GEKIVNPDGS EIKGLGLFKF
TTTRYMPQRF HDVQVGEFDP GNGKEPFTVV GFKMQFTLTE GDNSNCHFLK NKVGFGINKE
SKLEGFRRKN AIATWLIGPL LPLNPYLTRW ILDMAGEKDT PLAFEEEAIA AYQKHAREMV
YPGMHLHY