Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1318 |
Symbol | pgi |
ID | 8414203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1482271 |
End bp | 1483977 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645022915 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_003180333 |
Protein GI | 257785116 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.321309 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTAC CTACAGCACC AAACTTTTTG CCTACTGACG CAACACAAAC TAAAGCTTGG CGTGCACTTA CAGATCACTA CATCAACTTA AAAGATACTA AAGATACGCT GAAGAAATGG TTTGCAGAAG ATCCAGAGCG CGTCCAGAAT TTTACGTTTG AGCTGGACCA GTTCCTTATT GATCTTTCTA AAAATCTTGC CACGCAAGAG ACGCTTGATC TTTTGTGCAA CCTTGCAAAA GAGGTTAAGC TTGAAGAGCG TAGAGACGCT ATGTACGCTG GTAAGCATAT CAATACTACT GAGGATCGAG CAGTTCTTCA TACGGCTCTT CGTCGTCCTG CTTCTGAAGT TGGTACGCTT ATTGTTGACG GACAAGATGT TGTTGCTGAC GTCCACCAGA CTCTGAACAA GATGTATGCC TTCTGTGATC GAGTTCGCTC GGGGGAGTGG AAGGGTATTT CTGGTAAGCC TATCAAGACC GTTGTAAGCA TTGGTATTGG TGGATCAGAT CTTGGTCCTG TTATGGTCTA TGAAGCACTA AAGCCTTTTG CAGATGCTGG TATAACCGCT CGTTTTGTCT CCAACATTGA TCCTGCTGAC CTTGGCGAGA AAACCAAGGA TCTTGATCCA GAAACAACAC TTTTCATTAT TGTTTCTAAG ACTTTTACTA CGCTTGAGAC GCTTACCAAT GCTCGTTGTG CTCGCACGTG GCTTTTGGAA AAGCTTACTG AACAGGGCGT TATTGACGGT TCAAATGTTC AGAATGCAGA AGCTATTCGC AAACATTTTG TTGCCGTTTC AACCGCACTT AATCTAGTAG AAGACTTTGG TATTGATCCA GAGAATGCCT TTGGTTTTTG GAACTGGGTT GGCGGCCGTT ATTCAGTTGA TTCTGCGGTT GGCCTTGTAC TGGCGCTTGT TTTTGGCCCA CAACGCTTTG CAGAGTTCCT TAGCGGCTTT AATGCAGTTG ATGAGTATTT CAAGAACACT CCACTTAGAC AAAATGTTGT TGCTCTTATG GGTCTCTTAA ACGTTTGGTA CGTTAATTTC TTTGGTGTAG CGTCTCATGC AGTACTTCCG TATAGTCAAT ATCTGCATAG ATTCCCTGCA TACCTGCAGC AGCTCACCAT GGAGTCTAAC GGCAAGTCTA CCCGCTGGGA TGGTACCGCT GTTACTTCTA AGACAGGCGA AATTTTCTGG GGAGAGGCTG GCACTAATGG GCAACACGCA TTCTATCAGC TCATTCATCA GGGAACTCAG ATAATCCCTG CTGATTTTAT TGCATTTGCA AACACTGCTT TTGCTTCAAA AGATGCAGAT CTTGATGTTC ACGAGCTCTT CCTCTCTAAT TTCTTTGCGC AGACCAAAGC GCTTGCTTTT GGCAAGACTG CTGATGAGGT TAGGGCTGAG GGAACTCCAG AGTGGATGGT TCCTGCGCGC GTTTTTGAGG GAAATAGGCC AACTACTTCT ATCTTTGGTA AAGAGCTTAA CCCTCGCGCT ATCGGAACAC TTATTGCACT CTATGAACAT ATCACCTTTG TTGAAGGTGT GGTGTGGGGC ATTGATTCCT ACGATCAGTG GGGTGTTGAG CTTGGTAAAC AGCTTGCAAA GCAGATTTTC CCCGCAATTC ATAACGATGA AGAGTTGGCA AAACAAGACG CTTCTACTCA GTCTCTTGTA GCTTTCTATC GCAAAAACAG AAGATAG
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Protein sequence | MALPTAPNFL PTDATQTKAW RALTDHYINL KDTKDTLKKW FAEDPERVQN FTFELDQFLI DLSKNLATQE TLDLLCNLAK EVKLEERRDA MYAGKHINTT EDRAVLHTAL RRPASEVGTL IVDGQDVVAD VHQTLNKMYA FCDRVRSGEW KGISGKPIKT VVSIGIGGSD LGPVMVYEAL KPFADAGITA RFVSNIDPAD LGEKTKDLDP ETTLFIIVSK TFTTLETLTN ARCARTWLLE KLTEQGVIDG SNVQNAEAIR KHFVAVSTAL NLVEDFGIDP ENAFGFWNWV GGRYSVDSAV GLVLALVFGP QRFAEFLSGF NAVDEYFKNT PLRQNVVALM GLLNVWYVNF FGVASHAVLP YSQYLHRFPA YLQQLTMESN GKSTRWDGTA VTSKTGEIFW GEAGTNGQHA FYQLIHQGTQ IIPADFIAFA NTAFASKDAD LDVHELFLSN FFAQTKALAF GKTADEVRAE GTPEWMVPAR VFEGNRPTTS IFGKELNPRA IGTLIALYEH ITFVEGVVWG IDSYDQWGVE LGKQLAKQIF PAIHNDEELA KQDASTQSLV AFYRKNRR
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