Gene Apar_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1318 
Symbolpgi 
ID8414203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1482271 
End bp1483977 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content45% 
IMG OID645022915 
Productglucose-6-phosphate isomerase 
Protein accessionYP_003180333 
Protein GI257785116 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.321309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTAC CTACAGCACC AAACTTTTTG CCTACTGACG CAACACAAAC TAAAGCTTGG 
CGTGCACTTA CAGATCACTA CATCAACTTA AAAGATACTA AAGATACGCT GAAGAAATGG
TTTGCAGAAG ATCCAGAGCG CGTCCAGAAT TTTACGTTTG AGCTGGACCA GTTCCTTATT
GATCTTTCTA AAAATCTTGC CACGCAAGAG ACGCTTGATC TTTTGTGCAA CCTTGCAAAA
GAGGTTAAGC TTGAAGAGCG TAGAGACGCT ATGTACGCTG GTAAGCATAT CAATACTACT
GAGGATCGAG CAGTTCTTCA TACGGCTCTT CGTCGTCCTG CTTCTGAAGT TGGTACGCTT
ATTGTTGACG GACAAGATGT TGTTGCTGAC GTCCACCAGA CTCTGAACAA GATGTATGCC
TTCTGTGATC GAGTTCGCTC GGGGGAGTGG AAGGGTATTT CTGGTAAGCC TATCAAGACC
GTTGTAAGCA TTGGTATTGG TGGATCAGAT CTTGGTCCTG TTATGGTCTA TGAAGCACTA
AAGCCTTTTG CAGATGCTGG TATAACCGCT CGTTTTGTCT CCAACATTGA TCCTGCTGAC
CTTGGCGAGA AAACCAAGGA TCTTGATCCA GAAACAACAC TTTTCATTAT TGTTTCTAAG
ACTTTTACTA CGCTTGAGAC GCTTACCAAT GCTCGTTGTG CTCGCACGTG GCTTTTGGAA
AAGCTTACTG AACAGGGCGT TATTGACGGT TCAAATGTTC AGAATGCAGA AGCTATTCGC
AAACATTTTG TTGCCGTTTC AACCGCACTT AATCTAGTAG AAGACTTTGG TATTGATCCA
GAGAATGCCT TTGGTTTTTG GAACTGGGTT GGCGGCCGTT ATTCAGTTGA TTCTGCGGTT
GGCCTTGTAC TGGCGCTTGT TTTTGGCCCA CAACGCTTTG CAGAGTTCCT TAGCGGCTTT
AATGCAGTTG ATGAGTATTT CAAGAACACT CCACTTAGAC AAAATGTTGT TGCTCTTATG
GGTCTCTTAA ACGTTTGGTA CGTTAATTTC TTTGGTGTAG CGTCTCATGC AGTACTTCCG
TATAGTCAAT ATCTGCATAG ATTCCCTGCA TACCTGCAGC AGCTCACCAT GGAGTCTAAC
GGCAAGTCTA CCCGCTGGGA TGGTACCGCT GTTACTTCTA AGACAGGCGA AATTTTCTGG
GGAGAGGCTG GCACTAATGG GCAACACGCA TTCTATCAGC TCATTCATCA GGGAACTCAG
ATAATCCCTG CTGATTTTAT TGCATTTGCA AACACTGCTT TTGCTTCAAA AGATGCAGAT
CTTGATGTTC ACGAGCTCTT CCTCTCTAAT TTCTTTGCGC AGACCAAAGC GCTTGCTTTT
GGCAAGACTG CTGATGAGGT TAGGGCTGAG GGAACTCCAG AGTGGATGGT TCCTGCGCGC
GTTTTTGAGG GAAATAGGCC AACTACTTCT ATCTTTGGTA AAGAGCTTAA CCCTCGCGCT
ATCGGAACAC TTATTGCACT CTATGAACAT ATCACCTTTG TTGAAGGTGT GGTGTGGGGC
ATTGATTCCT ACGATCAGTG GGGTGTTGAG CTTGGTAAAC AGCTTGCAAA GCAGATTTTC
CCCGCAATTC ATAACGATGA AGAGTTGGCA AAACAAGACG CTTCTACTCA GTCTCTTGTA
GCTTTCTATC GCAAAAACAG AAGATAG
 
Protein sequence
MALPTAPNFL PTDATQTKAW RALTDHYINL KDTKDTLKKW FAEDPERVQN FTFELDQFLI 
DLSKNLATQE TLDLLCNLAK EVKLEERRDA MYAGKHINTT EDRAVLHTAL RRPASEVGTL
IVDGQDVVAD VHQTLNKMYA FCDRVRSGEW KGISGKPIKT VVSIGIGGSD LGPVMVYEAL
KPFADAGITA RFVSNIDPAD LGEKTKDLDP ETTLFIIVSK TFTTLETLTN ARCARTWLLE
KLTEQGVIDG SNVQNAEAIR KHFVAVSTAL NLVEDFGIDP ENAFGFWNWV GGRYSVDSAV
GLVLALVFGP QRFAEFLSGF NAVDEYFKNT PLRQNVVALM GLLNVWYVNF FGVASHAVLP
YSQYLHRFPA YLQQLTMESN GKSTRWDGTA VTSKTGEIFW GEAGTNGQHA FYQLIHQGTQ
IIPADFIAFA NTAFASKDAD LDVHELFLSN FFAQTKALAF GKTADEVRAE GTPEWMVPAR
VFEGNRPTTS IFGKELNPRA IGTLIALYEH ITFVEGVVWG IDSYDQWGVE LGKQLAKQIF
PAIHNDEELA KQDASTQSLV AFYRKNRR