| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1316 |
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| Symbol | |
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| ID | 8414201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1480914 |
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| End bp | 1481408 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645022913 |
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| Product | PTS system sorbose subfamily IIB component |
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| Protein accession | YP_003180331 |
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| Protein GI | 257785114 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.482248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.251904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATTTCAT TTGTTCGTGT TGATGACCGT ATGATTCATG GTCAAACAGT TACCCGTTGG
GCACTTGAGG TTCCCTGTGA TGGAATCATT GCAGTAAATG ATGCGGCTGC ATCAAATCCT
GTTCTTAAAT CTGCCTACAA ATCAGCAGCA CCTGACAAGA AAGTTTTTGT CTGGACATTT
GATCATTTTA AAGAGAACGC TCAGAAGGTT CTTGACAGCG ATTCTCGTTA TTTCCTTATT
ACTAAAAACC CAGTTGACAT GAAGAAAATT CTTGTTGACT TTGGTTTTAA GCCAGGAATT
AACACTATCA TTATCGGTCC TGGTAATGAT CGTCCTGGTG CGGTAAAACT GGGTAACAAC
CAGTCCTTTA CGCAAGAAGA GGGACAGGCA TTTGAGGATA TAACCAAAGC TGGTTATACC
GTTCAATTTG CTCTTCTTAA AGAAAAGGCA ATTGGTGAGT GGCCTAAATT CCGCGAGAAG
TTCGATGTAA AGTAG
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| Protein sequence | MISFVRVDDR MIHGQTVTRW ALEVPCDGII AVNDAAASNP VLKSAYKSAA PDKKVFVWTF
DHFKENAQKV LDSDSRYFLI TKNPVDMKKI LVDFGFKPGI NTIIIGPGND RPGAVKLGNN
QSFTQEEGQA FEDITKAGYT VQFALLKEKA IGEWPKFREK FDVK
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