| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1312 |
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| Symbol | |
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| ID | 8414196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1477875 |
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| End bp | 1478564 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 645022908 |
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| Product | SNARE associated Golgi protein |
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| Protein accession | YP_003180327 |
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| Protein GI | 257785110 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0586] Uncharacterized membrane-associated protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.192929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTTG TAAACTACAT CATTGAACTG CTTAGAGATC CTCGTTCATT TATTGCTTCA
ATGATTGCCA CCGGCCCTCT TGCTGCATAC GGTTTTGTTT TCCTAATTGT TTTTATTGAA
ACCGGTGTAG TCTTTTTCCC ATTTTTACCA GGTGATTCTC TGCTTTTTGC GGCGGGATTT
TTTGCCCATA GCGGCGGTTT TAATATTGTT TTACTGCTCG TTATTACTTG GTCTGCCGCA
ATTCTTGGTG ATCAGATGAA CTTTATGATT GGCCATTTCT TTGGAAAAAA AATTATTGCT
TCCGGAAAAG TAAAAGCACT CACCCCAGAG CATCTTGAAA AAACTCAGAA GTTCTTGGAT
AAGCACGGTC ATCTAGCAAT TTTCTTAGGA CGTTTCTTTC CTTTTATTCG CACGTTTGTG
CCTTTTATTG CTGGTATGGG AGGTATGCAC TGGAGAAACT TTGTCGTTTA CAACATTCTT
GGTGGTCTTA CGTGGTCCAC AATGTTTGTA CTTCTCGGTT ATTTCTTTGG TGGTATTTCT
GTAGTTCAGG AGCACTTTGA GCTATTGATT GTAGGAATTG TTGCCGTCTC AGTTACCCCA
ACAATTGTGG GGATTGTTCG CGGACGCATA AATAAGGGCG AGAAGAGCAG TAAAGAAGCC
ACAGATAAAG AGGGAGACGA GGCTAAGTAA
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| Protein sequence | MGFVNYIIEL LRDPRSFIAS MIATGPLAAY GFVFLIVFIE TGVVFFPFLP GDSLLFAAGF
FAHSGGFNIV LLLVITWSAA ILGDQMNFMI GHFFGKKIIA SGKVKALTPE HLEKTQKFLD
KHGHLAIFLG RFFPFIRTFV PFIAGMGGMH WRNFVVYNIL GGLTWSTMFV LLGYFFGGIS
VVQEHFELLI VGIVAVSVTP TIVGIVRGRI NKGEKSSKEA TDKEGDEAK
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