| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1309 |
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| Symbol | |
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| ID | 8414193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1473925 |
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| End bp | 1474818 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645022905 |
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| Product | modification methylase, HemK family |
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| Protein accession | YP_003180324 |
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| Protein GI | 257785107 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2890] Methylase of polypeptide chain release factors |
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| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.114861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGATG AAGTTTGGAC AATTCAGAAA ATTTTAACGT GGACCACTCA GCACCTGGAA
AAGAAAGGCG ATGAGCATCC ACGTCTTTCT GCGGAATGGC TTTTGTCTGC AGTGACGGGT
CTTTCTCGCG TTCAGCTTTA CACCAACTTT GACAAGCCGC TTTCTGCAGA CGAGCGTGCT
CGTATGCGCG AGGCAATTAA ACGCCGTGCA GAGGGCGAGC CACTCCAGTA CGTGACAGGA
GAGATGCCTT TTAGGCACCT GGTGCTTACC TGCGAGCCTG GTGTGCTTAT TCCGCGGCCA
GAGACAGAAG TTCTGGTAGA CGTTGCGCTA GAAGGCGTTG ATGCGTCAAC TCCAAATGCT
GACGGGGAAG TACGCGTGCT TGAGGTTGGT GTTGGAACGG GCTGCATTTC GCTCTCTATT
GCCACTGAGC GCCCACAGAC ACGCGTCTAT GCTACAGACC TTTCTCCTAA GGCGATTGCG
CTAGCAACTC GCAACAGAGA TGCTCTGGAC CTGCAGGACC GTGTGGAACT TATTGAGTGT
GACTTGGTAG AAGGAGTGCC TGCAGAACTT GCACAATCCT TCTCGGTGTT GGTGTCTAAT
CCGCCTTACA TTCCCACAAG CGTGCTTGAA CAGGAGGTCC CTGCTGAGGT CAAGGGTTTT
GAGCCCAAGC TGGCACTTGA CGGGGGCGAG GACGGTTTGG ACGTCTATAG GCGATTGCTT
GAGGTAGCTC CGCGCATGCT TTTGCCTGGA GGAATGCTTT GTGTTGAGCT CTACGAGGGA
CACTTGGACA AGGCAGCACA CCTTGCTGAG GAGCAGGGAA TTTGGGAGTC CGTTGAGGTT
AAAGAGGACC TGACGCACAG ACCACGCATT CTTGTATCTC GTCTAGTAAA GTAG
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| Protein sequence | MTDEVWTIQK ILTWTTQHLE KKGDEHPRLS AEWLLSAVTG LSRVQLYTNF DKPLSADERA
RMREAIKRRA EGEPLQYVTG EMPFRHLVLT CEPGVLIPRP ETEVLVDVAL EGVDASTPNA
DGEVRVLEVG VGTGCISLSI ATERPQTRVY ATDLSPKAIA LATRNRDALD LQDRVELIEC
DLVEGVPAEL AQSFSVLVSN PPYIPTSVLE QEVPAEVKGF EPKLALDGGE DGLDVYRRLL
EVAPRMLLPG GMLCVELYEG HLDKAAHLAE EQGIWESVEV KEDLTHRPRI LVSRLVK
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