Gene Apar_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1304 
Symbol 
ID8414188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1470588 
End bp1471388 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content43% 
IMG OID645022900 
ProductATP synthase F0, A subunit 
Protein accessionYP_003180319 
Protein GI257785102 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.5102e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.293813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGTTC TTGCGCAGTT GCCAGCAGAG ATGGCCGAGC TGCTCGAAAG TTTTTTACCA 
CACGCATTGG TTGGTAACAC CACCTTTGGT TTCACGAACT ACATTTTCTA TTTCTTGGTC
GCTGCTGTGA TTTTCCTTAT TGTCTGCTTT AGGTTTAAGA AAAAGCAGGC AGAGAGCGTT
GTTCCTAAAG GACGCTTTGT TAATGGTGTT GAGTATCTGA TTGAGTACAT TAGAGATGAT
GTCTGCAAGG CTTCTCTTGG AGAAACTTGG CGCACACACT TCCCATTCTT GATCACTATG
TTTATGTTCA TCTTAATTAA TAACATCATT GGTCTTATTC CTGGCGCACA TCCAGGTACT
GGTACTATTG GTGTTACTGC CGCTCTTGGT CTTTGCTCCC TTGGATATTT TATGTATGTG
GGCGCAAAGA AGATGGGCGT TATTGGGTAT ATCTTGAGCC TTGCACCAAA GGGTGTTAAT
CCTGTGATTG CAGCAGTTAT TTGGGTTATT GAGGTATTCT CAACATTCCT TCGTCTGGTT
ACTCTGGCTG TCCGTTTGTT CTGCAATATG TATGCAGGTC ACATCGTTAT GGGTACGTTT
GCAATTCTTG CATCTATGTA CTTTATGCCA GCACTTGAGA ACTTCTCCGC GTCAACAGCT
GCTCAGGCAG GCTTCTCGCT TTTCTGGATT CTGCTGTTGA TTATCATTTA CTTGGTAGAA
ACTATTGTTG CCTTCATTCA GGCATACGTT TTTACCCTAC TCTCCACTGT ATATATCCAG
CTGGTAGAGT CTGAGCACTA A
 
Protein sequence
MDVLAQLPAE MAELLESFLP HALVGNTTFG FTNYIFYFLV AAVIFLIVCF RFKKKQAESV 
VPKGRFVNGV EYLIEYIRDD VCKASLGETW RTHFPFLITM FMFILINNII GLIPGAHPGT
GTIGVTAALG LCSLGYFMYV GAKKMGVIGY ILSLAPKGVN PVIAAVIWVI EVFSTFLRLV
TLAVRLFCNM YAGHIVMGTF AILASMYFMP ALENFSASTA AQAGFSLFWI LLLIIIYLVE
TIVAFIQAYV FTLLSTVYIQ LVESEH