| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1304 |
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| Symbol | |
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| ID | 8414188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1470588 |
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| End bp | 1471388 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022900 |
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| Product | ATP synthase F0, A subunit |
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| Protein accession | YP_003180319 |
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| Protein GI | 257785102 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000065102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.293813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGATGTTC TTGCGCAGTT GCCAGCAGAG ATGGCCGAGC TGCTCGAAAG TTTTTTACCA
CACGCATTGG TTGGTAACAC CACCTTTGGT TTCACGAACT ACATTTTCTA TTTCTTGGTC
GCTGCTGTGA TTTTCCTTAT TGTCTGCTTT AGGTTTAAGA AAAAGCAGGC AGAGAGCGTT
GTTCCTAAAG GACGCTTTGT TAATGGTGTT GAGTATCTGA TTGAGTACAT TAGAGATGAT
GTCTGCAAGG CTTCTCTTGG AGAAACTTGG CGCACACACT TCCCATTCTT GATCACTATG
TTTATGTTCA TCTTAATTAA TAACATCATT GGTCTTATTC CTGGCGCACA TCCAGGTACT
GGTACTATTG GTGTTACTGC CGCTCTTGGT CTTTGCTCCC TTGGATATTT TATGTATGTG
GGCGCAAAGA AGATGGGCGT TATTGGGTAT ATCTTGAGCC TTGCACCAAA GGGTGTTAAT
CCTGTGATTG CAGCAGTTAT TTGGGTTATT GAGGTATTCT CAACATTCCT TCGTCTGGTT
ACTCTGGCTG TCCGTTTGTT CTGCAATATG TATGCAGGTC ACATCGTTAT GGGTACGTTT
GCAATTCTTG CATCTATGTA CTTTATGCCA GCACTTGAGA ACTTCTCCGC GTCAACAGCT
GCTCAGGCAG GCTTCTCGCT TTTCTGGATT CTGCTGTTGA TTATCATTTA CTTGGTAGAA
ACTATTGTTG CCTTCATTCA GGCATACGTT TTTACCCTAC TCTCCACTGT ATATATCCAG
CTGGTAGAGT CTGAGCACTA A
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| Protein sequence | MDVLAQLPAE MAELLESFLP HALVGNTTFG FTNYIFYFLV AAVIFLIVCF RFKKKQAESV
VPKGRFVNGV EYLIEYIRDD VCKASLGETW RTHFPFLITM FMFILINNII GLIPGAHPGT
GTIGVTAALG LCSLGYFMYV GAKKMGVIGY ILSLAPKGVN PVIAAVIWVI EVFSTFLRLV
TLAVRLFCNM YAGHIVMGTF AILASMYFMP ALENFSASTA AQAGFSLFWI LLLIIIYLVE
TIVAFIQAYV FTLLSTVYIQ LVESEH
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