| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1296 |
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| Symbol | |
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| ID | 8414180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1463320 |
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| End bp | 1464603 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022892 |
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| Product | UDP-N-acetylglucosamine1- carboxyvinyltransferase |
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| Protein accession | YP_003180311 |
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| Protein GI | 257785094 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
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| TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.871741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGTCA TAAAAGTAGT GGGTGGCAAC TCTGTCACAG GAGAGGTCAC CGTAGAGGGC
GCAAAAAACT CTGCCCTCAA ATTGATGGCT GCAACCATCA TGGCTCCTGG TGTTACTACA
CTTACCAACG TTCCTAATAT TGCAGACGTT CACGTCATGG GTAAGGTACT CAAGACGTTA
GGTGCTCGTA TTGAAGTCGT TGGTCTTCAC GAACTCAAAA TTGATACCAC AGATATTACA
AGCTGGGAGA CTCCTTACAG CCTTGTTGCA CAAATGCGTG CGTCAACTGC TGTTTTGGGC
CCCCTTATCT CACGTTTTGG TAAAGCTGTT GTTGCGATGC CAGGCGGGTG TAATATCGGC
GCACGTAAAA TTGATATGCA CATTTTGGGT CTTGAGGCTT TGGGCGTCGA ATTTAAGGTT
GAGCACGGCA ATATTCATGC AAGTGCTCCT CACGGCGTAA CCGGAGAGAC TGTTTCTCTT
GCTTTTGCTT CTGTTGGCGC AACAGAGAAC CTGATGATGG CATCAGTCTT TGCAAAGGGT
GTAACGGTCA TCGATAACGC AGCCCGTGAG CCAGAAATTG TCGATCTAGC TAACATGCTC
AATAAAATGG GTGCCAACAT TCAGGGCGCT GGATCTCCTG TTATTGAGAT TCATGGCGTA
ACTGAGCTGC ATCCTGTTGA GCATGAAGTT GTTGGCGATC GTATTGAGGC TGGTACTTTC
CTGGCTATCG GTGCGCTTAC TGGTGAGCCC ATTACCGTTC ACGGCTTCGA GCCAAATCAC
CTTGGTCTGG TGCTTAAGAA GTATGAGCAG ATGGGCATTA CCGTTGAGAC TGGAGATAGG
TGGGCACGGG CTTCTCGCCA GCAAGATCTT AAGGCTATCG ACATTCAGAC GCTGCCGTTT
CCAGGCTTCC CAACGGATAT GCAGGCACAA ACTATGACGC TGCTTGCTCT GGCAAAGGGA
ACCTGTATTA TTACCGAGAA TGTCTTTGAG AACCGCTTTA TGCTAGCGTC CGAGCTTTCC
CGTATGGGAG CTGATATCAC TATCGAGGGA CATCATGCTA TTGTTCGCGG TGTCTCCGGG
TTTGAGGGAG CACAGGTTAA GTCTCCAGAT CTTCGTGGCG GCGCTGCTCT TGTCATGGCT
GGTCTTGTGG CTGAGGGTGA AACAATCGTT TCCGATATTC ACCACATTGA CCGTGGTTAC
GAGGGATTTG TCGAGAAACT CGTCGCGCTG GGAGCAGATG CTCAGCGCAC TACCATTCCA
GACGACGATT TTATCGAAGG ATAG
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| Protein sequence | MDVIKVVGGN SVTGEVTVEG AKNSALKLMA ATIMAPGVTT LTNVPNIADV HVMGKVLKTL
GARIEVVGLH ELKIDTTDIT SWETPYSLVA QMRASTAVLG PLISRFGKAV VAMPGGCNIG
ARKIDMHILG LEALGVEFKV EHGNIHASAP HGVTGETVSL AFASVGATEN LMMASVFAKG
VTVIDNAARE PEIVDLANML NKMGANIQGA GSPVIEIHGV TELHPVEHEV VGDRIEAGTF
LAIGALTGEP ITVHGFEPNH LGLVLKKYEQ MGITVETGDR WARASRQQDL KAIDIQTLPF
PGFPTDMQAQ TMTLLALAKG TCIITENVFE NRFMLASELS RMGADITIEG HHAIVRGVSG
FEGAQVKSPD LRGGAALVMA GLVAEGETIV SDIHHIDRGY EGFVEKLVAL GADAQRTTIP
DDDFIEG
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