| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1292 |
|---|
| Symbol | |
|---|
| ID | 8414176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | - |
|---|
| Start bp | 1459146 |
|---|
| End bp | 1460561 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 645022888 |
|---|
| Product | phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I |
|---|
| Protein accession | YP_003180307 |
|---|
| Protein GI | 257785090 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1109] Phosphomannomutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACCG CATTGGATAA AAGACCTGAC ATACTCCGTT TTGGCAGCGA TGGCTGGCAA
GCTCGCTATG ACAAAGGCTT TACCAGGGAT AATGTAGTTA GACTCGCAGA GGCCCTCGGT
ACTGTCTGGT CACAAGAGCT GCCTGGCGGT ATTGTGTTTG TTGGGTTTGA CACGCGCTTT
GAGGCAGATT CGTCTGCTCT TGAAGCTGCC GCAACACTAG CCTCCTTTGG TCTAGACGTG
CGTGTTTCCG AGACGTTTTG TCCCACACCA TCTATTTGCT GGGCCTGCGC GCATCACGAT
AATGTAGCTG GTGGCCTTAT CATTTCTGCA ACTGAACTTT CCTGCGAATA TTGCGGCATG
ATTATTCGCG CTGCTAATGG TGGTCCAGTT TCGCGTGACT TTCTTCAGCG CGTGGAATCG
ACAACGCCGC TTGAGCCAAC AGATCAGCGT GGAACTTTTA CCACTACAGA TATCGTGACA
CCTTATAAAA GTGCGCTGCT TGATCAGATT AATGTGTCTG TTATTAAGGA GTTGCGCCCT
AGCGTGGTGG TTGATCCCAT GTACGGCGCG GCAACAGACC TGCTTGCCGA CGTGCTTTCG
TCTGCTGGAT GCGTTGTGCA TCAAATGCAT CAAGGTCCTG TTAGGGATTT TGGTGGTATC
CACCCACAGC CAGCAGATCC ATGGGCCGAC GAGTGCTCTT CAATGGTGGT AACCCGCCAT
GCGCAGTTGG GACTTTTGAT TGATTGCGAC GGAGACCGCG CTGCTGCTGT AGATGAAAGC
GGTCGTCTCC TTAGTCCACA CGAGCTTATC CCGCTCATTA CACGTCATCT TGTACAAAAT
CGTAAGCAAA CCGGTCGTGT TGTTTCTACG TTGACCTGTT CTGCAACGGT TTCTAGGCAA
GCCGCTCATC TTGGATTGGA ATCTGCGAGC GTACCCGTTG GATTTGCTCG ACTTTATTCG
GAGATTGAGC AGGGAGACGT TCTTCTCGCT GCAGAGGAGT ACGGCGGCAT CTGTATTCCG
AGTCACCTCT TGGAGCGAGA CGGCCTGCTT GTGGCTCTGC TTGTTGTCGA GATGCTTGCG
TACACCCATA AATCGCTTGC ACAGCTTGTT GCTGAGGATG AGGCTGAGCT GGGTCGCATG
TGTTATAGCA GGCGAGGAGT GCGTCTTGAC GCTGCGGCTA CTCAAGCGTT CAGGAACATC
CTTCCAGGTC TTAACCCAGA AAATGTTGCA GGTCAAGTAC CTGTTTTGGT AAGTCACGCA
GATGGTCTTA AGCTTCAGTT CAAAGACGAT TCATGGGTGC TTATTCGTCC TTCTCGTATG
GATGCTCTGG TACGCGTATA TTCTGAGGCT GCTAACGAGA CGCTTCGTGA TCAGCTCCTC
GACGCAGCCT GCCAGATTGT AAAAGACGAA ATTTAA
|
|---|
| Protein sequence | MPTALDKRPD ILRFGSDGWQ ARYDKGFTRD NVVRLAEALG TVWSQELPGG IVFVGFDTRF
EADSSALEAA ATLASFGLDV RVSETFCPTP SICWACAHHD NVAGGLIISA TELSCEYCGM
IIRAANGGPV SRDFLQRVES TTPLEPTDQR GTFTTTDIVT PYKSALLDQI NVSVIKELRP
SVVVDPMYGA ATDLLADVLS SAGCVVHQMH QGPVRDFGGI HPQPADPWAD ECSSMVVTRH
AQLGLLIDCD GDRAAAVDES GRLLSPHELI PLITRHLVQN RKQTGRVVST LTCSATVSRQ
AAHLGLESAS VPVGFARLYS EIEQGDVLLA AEEYGGICIP SHLLERDGLL VALLVVEMLA
YTHKSLAQLV AEDEAELGRM CYSRRGVRLD AAATQAFRNI LPGLNPENVA GQVPVLVSHA
DGLKLQFKDD SWVLIRPSRM DALVRVYSEA ANETLRDQLL DAACQIVKDE I
|
|---|
| |