| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1244 |
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| Symbol | |
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| ID | 8414123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1393445 |
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| End bp | 1394110 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022836 |
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| Product | phage SPO1 DNA polymerase-related protein |
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| Protein accession | YP_003180260 |
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| Protein GI | 257785043 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGCTT CTCCTGCTTC GCCTAAAAAC GCTTTAGGTA GAAAACGCAT GTCAAACGTA
GAATATTCTA AAATCGCATA TTCTAAACAA GCAGGTCAAA CTCTTGATGA GATTTGCGAG
CAGATAGCTG ATTGTAAAAA GTGTCCGCTT TGGGAAACGC GCACCAATAT TGTGTTTGGC
GGGCCAAATC CCACGGCTCG TATTATGATT GTAGGAGAAG CTCCTGGTAA AAATGAGGAT
CTAAGCGGTC AGCCTTTCGT GGGAACATCG GGCAAAAAAC TTGATGCACT GTTAGAGGAA
GTTGGTCTTT CTCACCAGGA TGTTTTTATC TCTAACGTGG TCAAATGCCG ACCGCCTTCA
AATAGAAACC CCAAGGTAGC TGAGGTGGAG GAGTGCTCTC CGTATCTTCG CGACCAGATT
CGTGCCATTA AGCCAGACGT TATTGTTTGT TTGGGAAATT TTGCTACACA GTTTGTCATG
CATACCGATA AGGGCGTGAC AGAGCTGCGC GGCAAGTTTT ACCAGATAGG CGCCTTTAGT
GTGCTACCTA CCATGCATCC TGCATCAACT ATTTATCGCA AAGAATGGGC ACAGTTCCTC
AAAGACGACT TGCAACTTCT TGCTGATTGG CTTAAGAAAC ATCCTCGAGG AGGCTCTTGT
GACTAA
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| Protein sequence | MAASPASPKN ALGRKRMSNV EYSKIAYSKQ AGQTLDEICE QIADCKKCPL WETRTNIVFG
GPNPTARIMI VGEAPGKNED LSGQPFVGTS GKKLDALLEE VGLSHQDVFI SNVVKCRPPS
NRNPKVAEVE ECSPYLRDQI RAIKPDVIVC LGNFATQFVM HTDKGVTELR GKFYQIGAFS
VLPTMHPAST IYRKEWAQFL KDDLQLLADW LKKHPRGGSC D
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