| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1235 |
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| Symbol | |
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| ID | 8414114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1387367 |
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| End bp | 1388671 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022828 |
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| Product | histidine kinase |
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| Protein accession | YP_003180252 |
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| Protein GI | 257785035 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.14404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTCGC TTGTTCTGCT GTTCACGGTG ACGCTGTCGG TCATCATGTT TGCTAGCACT
CAGGAGATCA GACAGAAGAA CATGGACGTG CTCAACCGCT ACGCCAGTCA GTATTCGCTT
GAGAAGGAAA AAGGTAGCTC TGAGGGACAG AGTGGCCCAG AGGGTCAGGG TAGTTCTGAG
GGGCAGGGTA GCTCCGAGGG ACAGACAAGC TCCGAAGATC AGAGTCCGCA GCAGCCACTG
GTCAAACCTG ACGCTCAGCT GTCAAACAAA TCTGACAATC AACCGCCAGG TCAGAGATCT
GCTTACGAGC TCTCAACGTT TTACTCAGTA TCGTTTTCTG TAGACGGCTC CGTACTTTCA
GTCTTTAATG GCGAGAAAAC CGTTAGCTCT GATGAAAACC TTACTGAGTT TGCTCGTCAG
ATTTTGAACG AAGGAAATCC TTCTGGTAGA ACAGGCAATC TTTCTTACGT GGTTATGAAA
AAAGATGGCT ATACGCTTGT GGCGTTTATG GATAACACCG TTTCTGAAGC CGGTCTTCAG
ACCATGATGC GAAACGCTCT GCTTGTAGGA GGCGTATCGC TGGTAGGTAT GTTCTTTATT
TCTGTGTTTC TGGCAAAGCG CATTATTCGT CCACTTGAAG AGAGTGATAA AAAGCAGAAG
CAGTTCTTAT CCGACGCAAG TCACGAGCTC AAGACCCCTA TTGCGGTTAT TGACGCCAAT
GCAGAGATTC TATCCAGAGA ACTTAGTCAC AACGAATGGC TCTCCAACAT TCAATACGAG
AGCAATCGTA TGGGAAAGCT AGTAAAACAG CTGTTAGATT TTTCTAGTGC GGAGAATAGA
GAAGTGCCTA TGGAAAAGCT GGACTTCTCT CATGTGGTTA CTGGAGAATC ACTGGTCTTT
GAGACGTTTG CGTTTGAGAA TGGCAAGGTG CTTCAAAGCA ACATTGAAGA GGGGATTGTT
CTTACAGGCA ATCAGAATCA GCTTACGCAG GTTATTTCTG TGCTGCTTGA TAACGCCCTG
AGGCACACAA CGGGTACTCA GATTGAGTTA AATCTTAAGA AACAAGGTCA TAGCGCCATC
TTAAGTGTTA GTAATGACGC GGAAGAGATT TCTCAAGAAA AGCTTGAGCA TCTGTTTGAT
CGTTTTTATC GCGTTGATGA TGTACGAAAT AGTGAGGATA ATCACTATGG ACTAGGTCTT
TCGATTGCAC AAGCTGTGGT TCAAAAGCAT GGTGGAACTA TTAATGTAGG CTATTCAGAG
GGTCAGATTA CTTTTACTGT TCAGCTTCCT ATTAAGGGCA AATAA
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| Protein sequence | MVSLVLLFTV TLSVIMFAST QEIRQKNMDV LNRYASQYSL EKEKGSSEGQ SGPEGQGSSE
GQGSSEGQTS SEDQSPQQPL VKPDAQLSNK SDNQPPGQRS AYELSTFYSV SFSVDGSVLS
VFNGEKTVSS DENLTEFARQ ILNEGNPSGR TGNLSYVVMK KDGYTLVAFM DNTVSEAGLQ
TMMRNALLVG GVSLVGMFFI SVFLAKRIIR PLEESDKKQK QFLSDASHEL KTPIAVIDAN
AEILSRELSH NEWLSNIQYE SNRMGKLVKQ LLDFSSAENR EVPMEKLDFS HVVTGESLVF
ETFAFENGKV LQSNIEEGIV LTGNQNQLTQ VISVLLDNAL RHTTGTQIEL NLKKQGHSAI
LSVSNDAEEI SQEKLEHLFD RFYRVDDVRN SEDNHYGLGL SIAQAVVQKH GGTINVGYSE
GQITFTVQLP IKGK
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