| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1214 |
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| Symbol | |
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| ID | 8414092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1359570 |
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| End bp | 1361768 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645022808 |
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| Product | ATPase associated with various cellular activities AAA_5 |
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| Protein accession | YP_003180233 |
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| Protein GI | 257785016 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1401] GTPase subunit of restriction endonuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.581782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACAACG TGGCGATACA GATAGACAGT CAACACTCGT GGACGGGCTT CTACCAGAAA
CTCGCAGACA AGCTGCTGGC TTACAGGAAT GACCGACAGA CACTCATCTC CATGTTGAAC
GACGCGTATT CGCGCACTGG GATGCAACTG CCCAAGCTCG AGGCAGATGA GCTGAATGAT
ATTGACCCGT TCACCGTCTT CGGCCTTTTC AATAAGGGCA TCACGGATGC AAACCGACGG
AAGATCATCG CAGTCATCGC CGAGGTGTTC GACATTGGGG CAGACCAGCC CACGGACTTT
GAGGGCATCC CCGTGCTCAA CAATCTCAAC GCGACCTTCT ATGCCTTCGC CAACGACGAA
CGGCGCAGTG AGCACGACAT CGATAACCTC TGGAGCGTGT TCGAAGCCGA ACTCGCGCTA
GACGCGGATG ATAGCGAAGA GAACCGCAAG GCATTCGTCG ATGCATTCGA TGCCACAGTC
ATCCAGTTTT CGCTTGGCTG GAAGCTCACC ATGGGCCTCT ACTGGGCAAG GCCCTATAGC
TTCATCAGTT TGGATTCGCG CAACCGCTGG TTTATGGCCG ACGTCGCAAA GACCGGTAGC
GCCATCGCCA ACGCCGTGCC GAAGGAGAAG GACTCGCCAG TTCACGACGG AGAGCGCTAC
CTCGCCATTT GCGACACCAT TAAGTCGGAG CTTAGAAGCG AAGAGTGCCC GTATACAGAC
TTCCCCTCGC TGACAGCTGC CGCCTTCGTG GAGTCCGAGC GCGTCAACCA GGAGAGGAAG
GCTGCCGAGA AGGCAGCAGC TGTGAAAGCG GAGGAAAACG CCCTCGGAGA CGAGGGTATC
AGGACCACGC ACTACTGGAC CTACTCCCCG GGAGACGGCG CCGCTAGGTG GGACGACTTC
TACGCGCGCG GCATCATGGG CATCGGCTGG AGCAAGCTCG GCAACGTCGA GCAGTACGCC
AGCAAGGAAG ACATCCGCAA GAGCCTGCGC ACCCTGTACA GCAGCAAGTT CTCGCAGAAG
AATTCCGCAC TCGCGCTCTG GCAGTTCTCT CGTGAGTTGA AGCCGGGCGA TGTCGTCTTC
GCGAAGCGGG GCCGCAGCGT GATCATAGGC CGCGGCGTCG TCGAGGGGGA CTACCAGTTC
GACGACAATG GCGACTCCTA CCCGAACATC CGCAAGGTAC GCTGGACGCA CGGCGGAGAG
TGGCAAACAG AAGACCTCCT CGCCATGAAG ACCCTGACGG ACATCACCGC CTATCCCGAC
CTCGTCGCGA AGCTCGACTC GTTCTTCGAG GACGAGGACG GCGAACCCGA GGAAGGCTCA
GGCGCAGTCG AATACCCGGC GTACACACCC GAGGACTTCC TCTCGGAGGT CTACATGGAC
GCCGAGCGCT ACAGGACCCT CGCCAACGTC CTGCGCGCGA AGAAGAACAT CATCCTGCAG
GGCGCCCCGG GCGTGGGCAA GACCTTCGCC GCAAAGCGCC TGGCCTATTC CATGATGGGT
GTGAAGGACG CCGAGCGCGT GATGATGGTG CAGTTCCACC AGAGCTACAG CTACGAGGAC
TTCATCGAGG GGTTCCGCCC GAATGCGCAG GGCTTCGACC TCGAGAAGGG CACGTTCTAC
AGCTTCTGCA AGAAGGCGCA GGACGACTCT GACAACGACT ACTTCTTCAT CATCGACGAG
ATCAACCGCG GTAACCTCTC GAAGATCTTC GGCGAGCTGT TCATGCTCAT CGAGAACGAC
AAGCGCGGAC CGAGGAACAC GCTGCAGCTG CTCTACTCGC ACGAACTGTT CTACGTCCCG
AGCAACGTTT ACCTCATAGG AATGATGAAC ACAGCTGACC GCTCACTCGC CATGCTCGAC
TACGCGCTGC GCCGCCGCTT CGCGTTCTTC GAGCTCTGAC CAGCTTTCGA CACGGAGAGC
TTCGCCGCGT ACCAGGAGGG GCTTGCCAGC GAGAAGTTCG ACAGGCTCGT CGCCTGCGTC
GTGAAGCTGA ACGAGGCGAT CGCTTCCGAC GAGTCGCTCG GAGACGGCTT TTGCATCGGC
CACAGCTACT TCTGCCGCGT GTCTCCGGAC GACGTGACGG ATGAGAAGCT CTCGGAAATC
GTCGACTACG AGCTCGTGCC GATGCTGCGC GAGTACTGGT TTGACGAGCC CTCCAAGGTC
GATGACTGGG CAGACAAACT ACATAGGTCC ATCAAGTGA
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| Protein sequence | MDNVAIQIDS QHSWTGFYQK LADKLLAYRN DRQTLISMLN DAYSRTGMQL PKLEADELND
IDPFTVFGLF NKGITDANRR KIIAVIAEVF DIGADQPTDF EGIPVLNNLN ATFYAFANDE
RRSEHDIDNL WSVFEAELAL DADDSEENRK AFVDAFDATV IQFSLGWKLT MGLYWARPYS
FISLDSRNRW FMADVAKTGS AIANAVPKEK DSPVHDGERY LAICDTIKSE LRSEECPYTD
FPSLTAAAFV ESERVNQERK AAEKAAAVKA EENALGDEGI RTTHYWTYSP GDGAARWDDF
YARGIMGIGW SKLGNVEQYA SKEDIRKSLR TLYSSKFSQK NSALALWQFS RELKPGDVVF
AKRGRSVIIG RGVVEGDYQF DDNGDSYPNI RKVRWTHGGE WQTEDLLAMK TLTDITAYPD
LVAKLDSFFE DEDGEPEEGS GAVEYPAYTP EDFLSEVYMD AERYRTLANV LRAKKNIILQ
GAPGVGKTFA AKRLAYSMMG VKDAERVMMV QFHQSYSYED FIEGFRPNAQ GFDLEKGTFY
SFCKKAQDDS DNDYFFIIDE INRGNLSKIF GELFMLIEND KRGPRNTLQL LYSHELFYVP
SNVYLIGMMN TADRSLAMLD YALRRRFAFF ELUPAFDTES FAAYQEGLAS EKFDRLVACV
VKLNEAIASD ESLGDGFCIG HSYFCRVSPD DVTDEKLSEI VDYELVPMLR EYWFDEPSKV
DDWADKLHRS IK
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