| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1200 |
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| Symbol | |
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| ID | 8414078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1346556 |
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| End bp | 1347470 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022794 |
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| Product | transcriptional regulator, RpiR family |
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| Protein accession | YP_003180219 |
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| Protein GI | 257785002 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGGGTG TTCGTTTACG CCTGGAAGAG TATCGCAAGA ATGCCAGTTC GGCTGAACGC
GATATTATTG ACTACATTTT GTCCGACCCA GAGGCAGTAG TTGGTCAGTC AATCCATAAA
CTTGCTGCTC AAACGTATAC ATCTGCATCA ACGGTGGTTA GACTTTGCAA GAAGCTTGGC
TGCGGTGGCT ATAAAGAGTT TCAGCAGGCT CTTATTTATG AGCTGGCGGT AAGCAACAAG
AGCAACGATA TTGCTGTTGG CGGCGTTATT GCAGGTGACA CTACTGACGT GATCATTGAA
AAAGTAACTG CAAAGAACAT TTCTTCGTTG GAACTTACCA TGCAGTTGCT TGATGCTCAG
GTCGTTGACT CGGTTGTTTC ACTTATGATG CAAGCGCATT CTATCTGTCT TTTTGGTATG
GGAGCTTCGC TTCTGGTTGC AAGAGATCTG CAGCTCAAGC TTATGCGCCT CAACATTAAC
TGCAACTTAA GCGATGATTA CCACTCTCAG TTGCTCTACG CCAAAAACAT GAGCCGAGAA
GATCTTGCCA TTGTGGTTAG TTACTCAGGT CTTACGCGTG AAGCCATTGA GTGTGCTTGG
ATTGCAAAAG CAAACGGCGC CAAGGTAATC TCCATCACTC GTGGTGGTAT TGACTCGGAA
TTAATTCATC GTTCTGACTA TGTTTTGGGT GTTGCAGAGA CTGAGCACAT TATGAGAAGC
GGCGCAATGT CTTCACGAAT TGCCCAGCTC AATGTAGTAG ACGCACTTTT TGCAGCATAC
GTAAACAGAA ACTACGAGAA GAGCGTTAAG CGTTTCTCGA CAAACTACAT TGGCAAATTA
GATTCAGCTG AGCGTGTTGC TACGCTTTCT TCTGATGAAG ATTTGCCTGG TATAGCTAAC
GACGTTATTG CGTAG
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| Protein sequence | MRGVRLRLEE YRKNASSAER DIIDYILSDP EAVVGQSIHK LAAQTYTSAS TVVRLCKKLG
CGGYKEFQQA LIYELAVSNK SNDIAVGGVI AGDTTDVIIE KVTAKNISSL ELTMQLLDAQ
VVDSVVSLMM QAHSICLFGM GASLLVARDL QLKLMRLNIN CNLSDDYHSQ LLYAKNMSRE
DLAIVVSYSG LTREAIECAW IAKANGAKVI SITRGGIDSE LIHRSDYVLG VAETEHIMRS
GAMSSRIAQL NVVDALFAAY VNRNYEKSVK RFSTNYIGKL DSAERVATLS SDEDLPGIAN
DVIA
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