| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1191 |
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| Symbol | |
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| ID | 8414069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 1333903 |
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| End bp | 1335537 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645022785 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_003180210 |
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| Protein GI | 257784993 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.16614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0761619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGG GTTTTGAACT ACTGAACGAT CCCTTCCTCA ACAAAGGAAC CGCTTTTTCG
CAGGAGGAAC GACAGAAGTA TGGTCTGGTA GGTCTTTTAC CTCCAAACAT TCAGACCATC
GAGGAGCAAG CAGAGCAGGC ATATGTGCTT TTCCAGCAGT ATCCTGACCT CGAGACTAAG
CGTCACTACC TGATGAGGCT TTTCTCCGAA AACCGCACGC TTTTCTATAA CCTGTTCTCA
AAGCACGTCG AAGAGTTCAT GCCTATCGTC TACGATCCAA CCATTGCACC TGACATTGAA
CAGTACTCCC TGCGCTACGT TGACTCGCAG TACGCATGCT TCCTATCCGC TGATCACCCT
GAGGACCTTG AAACTTCGCT GAAGGACGCA GCCGCAGGTA GAGACATTGA CCTGATTGTC
GTTACCGACG CAGAGGCCAT TCTGGGCATT GGTGACTGGG GCACCAACGG TGTCGAAATT
TCCGTCGGCA AGCTCATGGT TTACACCGCT GCAGCTGGCG TTGATCCAAA CCGCATCATG
CCTGTTGTCA TTGACGCAGG CACCAACCGC CAGGAGTTGC TCGATAACCC TCTCTACCTG
GGCGAGCGTC ACAAGCGCGT TGATGAGGAC CGCTACAACG CCTTCATTGA TAACTTTGTA
ACCACCGTGG AGCAGCTCTT CCCTAACCTC TACCTGCACT TTGAGGACTT CGGACGCTCA
CACGCTGCAG CAATCCTGGA CCGCTACAAA AACACCTACC CCGTCTTTAA CGACGACGTC
GAGGGCACTG GCATTGTTAC CCTCGCAGGC ATCCTCGGCG GCCTCAACAT TTCTGGCGAG
AAACTCGTTG ACCAGGTATA TCTCTGCTTT GGCGCAGGAA CCGCCGGTTG CGGCATTGCT
GAGCGCGTAC TACAAGAGTT TGTGGACCAG GGAATGGATC GCGAGGAGGC TCGCAAGCGC
TTCTACCTGG TAGATCGCCA GGGCCTGCTC TTCGACGACA TGGACAACCT TACTCCACAG
CAAAAGCCCT TTGCTCGCAA GCGCTCAGAA TTTGCAAACG CTGATGAGCT CACTAACCTT
GCAGCTGTTG TAAAGACGGT CCATCCAACA ATCATGGTTG GCACCTCTAC CGTTCACGGT
GCCTTCACCG AGGAGATTAT TAGCGAGATG GCAGCTCATT GTAAGCGCCC AATGGTCTTC
CCTCTATCCA ACCCAACTAA ACTTGCAGAG GCAGCCGCTC AGGACCTGCT GACCTGGACT
GATGGTCGCG CGCTTGTAGC ATGCGGTGTC CCATCCGATG ATGTTGAGCT CAACGGTATA
ACCTACCAGA TTGGCCAGGC CAACAACGCT TTAATCTATC CGGGTCTTGG ACTTGGCGTT
CTTGCATCAA AAGCTCGCCT ACTCACAGAC CAAATGATTT CGCTGGCAGC TCACTCACTT
GGCGGAATTG TTGACACCAC AAAGCCTGGT GCTGCAATTC TTCCTCCAGT CTCCAAGATT
ACTGAGTTCT CTGAGCGTAT TGCCATTGGT GTTGCAGAGG AAGCAATCAA GCAAGGTCTA
AACCGCAAAC CAATCGCTAA TGCAAAAGAG GCAGTTGATG CCCTCAAGTG GTTCCCTGTC
TACAAAGAAC TCTAA
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| Protein sequence | MKTGFELLND PFLNKGTAFS QEERQKYGLV GLLPPNIQTI EEQAEQAYVL FQQYPDLETK
RHYLMRLFSE NRTLFYNLFS KHVEEFMPIV YDPTIAPDIE QYSLRYVDSQ YACFLSADHP
EDLETSLKDA AAGRDIDLIV VTDAEAILGI GDWGTNGVEI SVGKLMVYTA AAGVDPNRIM
PVVIDAGTNR QELLDNPLYL GERHKRVDED RYNAFIDNFV TTVEQLFPNL YLHFEDFGRS
HAAAILDRYK NTYPVFNDDV EGTGIVTLAG ILGGLNISGE KLVDQVYLCF GAGTAGCGIA
ERVLQEFVDQ GMDREEARKR FYLVDRQGLL FDDMDNLTPQ QKPFARKRSE FANADELTNL
AAVVKTVHPT IMVGTSTVHG AFTEEIISEM AAHCKRPMVF PLSNPTKLAE AAAQDLLTWT
DGRALVACGV PSDDVELNGI TYQIGQANNA LIYPGLGLGV LASKARLLTD QMISLAAHSL
GGIVDTTKPG AAILPPVSKI TEFSERIAIG VAEEAIKQGL NRKPIANAKE AVDALKWFPV
YKEL
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