| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1184 |
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| Symbol | |
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| ID | 8414062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1325479 |
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| End bp | 1326252 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645022778 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_003180203 |
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| Protein GI | 257784986 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.916319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00824592 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGTCAAAGC CACGCCCTTT TCGCCTTTCA GCACATGGAG CAAAAGCCGA TACTGTTGCC
GTAATTGTGG CTGGCGGCAT TGGCGAGCGC TTTGGCTATC CCGACGGCAA GCAATTTATT
TCTGTCTGCG GTCTTCCGTT GATGAGCTGG TCAATCCTTG CGTTTGATCA CGCTCCAAGC
GTGGCTCACA TTGTGATTGC TTGCTCTGAC GAGAAACGCG CTGCAGTTCA AGAGGATGTT
CTGGGTAAGC TTGTGCTCCA CAAGCCCATT CACTTTGCAA CGTCTGGCAA CACCAGGCAG
GATTCGGTTT ACAATGCGCT TCAGGTAGTG CCTGCTGGAT ACAATTTTAT TTCTGTTCAC
GATGCGGTTC GTCCGCTTAT TGAGGTAGAG ACAATCGAGC AGGTTATTAG CACGGTTCGC
AAGTCTCCTA AGATTGCAGG AGCAATTTTG GCTCATCGTG CAACAGATAC GTTGAAGCGC
GTAGACGGCG CAACCATTGT AGATACGCCT GATCGCTCAA CTTTTTGGGC TGCTCAGACC
CCTCAAGTGT TCAAGACACG CACGCTCCTT GAAGCCCATG AAGTGGCTCG CCAGGAAGGC
TATCAGGGAA CCGATGACTC ATCGTTAGTT GAACGATTGG GACTTACGGT GCTGTGCGTT
GAGTCGCAAC GAGAAAACGT GAAGGTCACG TATCCGTCTG ATTTTGCAAT TGTTGAGGCT
ACGCTCAGCC GTCGCCTGGT AGAAGGCGCA ACTGGAAGTG GGGCTGTAGA GTGA
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| Protein sequence | MSKPRPFRLS AHGAKADTVA VIVAGGIGER FGYPDGKQFI SVCGLPLMSW SILAFDHAPS
VAHIVIACSD EKRAAVQEDV LGKLVLHKPI HFATSGNTRQ DSVYNALQVV PAGYNFISVH
DAVRPLIEVE TIEQVISTVR KSPKIAGAIL AHRATDTLKR VDGATIVDTP DRSTFWAAQT
PQVFKTRTLL EAHEVARQEG YQGTDDSSLV ERLGLTVLCV ESQRENVKVT YPSDFAIVEA
TLSRRLVEGA TGSGAVE
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