| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1183 |
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| Symbol | |
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| ID | 8414061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1324991 |
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| End bp | 1325476 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022777 |
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| Product | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_003180202 |
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| Protein GI | 257784985 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.389932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00326019 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGGAGC TTAAAATTGG TCACGGATAT GATGTTCATC GCTTGGTAGA AGGTAGAAAG
CTTATCCTTG GCGGTGTTGA AATTCCGCAT GAAAAGGGTC TTCTCGGTCA CTCTGATGCC
GATGTTTTGG CTCATGCGCT TATGGATGCC CTGCTAGGAG CTATGCGTGC TGGCGATATT
GGTCAGCTCT TTCCAGATAC AGACCCTGCT TATGAAGGCG CTGATTCTAT GGTGCTTCTA
TCTCATGTCA TGCAGCTTGT TCGTGATAAG GGCTTTGAAC TTGTGGACTG TGATTGCACC
GTTGCAGCTC AAGCGCCTAA GTTGCTTCCT TATCGTGAGG CTATGAGAAA CCGTATGGCT
GAGGTCATGG GTGTTACACC AGATAAAGTT GGCGTAAAAG CAACTACCAC TGAAGGCCTT
GGCTTTGTGG GTCAACAAGA AGGCATTGCT GCCTGGGCAG TTGTCCTGCT GGGACGTAGT
GCGTAA
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| Protein sequence | MPELKIGHGY DVHRLVEGRK LILGGVEIPH EKGLLGHSDA DVLAHALMDA LLGAMRAGDI
GQLFPDTDPA YEGADSMVLL SHVMQLVRDK GFELVDCDCT VAAQAPKLLP YREAMRNRMA
EVMGVTPDKV GVKATTTEGL GFVGQQEGIA AWAVVLLGRS A
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