Gene Apar_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1175 
Symbol 
ID8414048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1316360 
End bp1316905 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content47% 
IMG OID645022764 
ProductNusG antitermination factor 
Protein accessionYP_003180194 
Protein GI257784977 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000364949 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000228976 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCTAAGC GCTGGTATGT AGTTCACACC TATTCAGGTT ATGAAAACAA GGTAAAAACT 
GACCTTGAGC ACCGTATTGA GACCTATGGT CTTGAGCGTG CTGTTGTTGA TATTCAGATT
CCTACTGAGG AAGTTACTGA AGTCAAGGAC GGCGGTAAGC GCGAGACCAA AGAATCTAAG
GTTTTCCCAG GCTATGTTCT TGTTCGCATG GAGCTGGATG ACAATACGTG GGCTGTTGTT
CGCAACACAC CAGGTGTAAC TGGTTTTGTT GGCATCGACG GTAAGCCAGT TCCTCTGCGT
CGCGATGAGT TTGATAAGAT TATGCGTCGT GGCGGCATGA AGACAGGTAG CCCTGTACCT
AAGCGTACAG CAACCAATAT TGAGGTCGGT CAGGCAATTC ATGTTCTTTC AGGTCCTCTT
GCTGACTTTG ATGGCACTGT TTCTGAGGTC AATGCAGAGT CCGGCAAGAT TAAGGTTATG
CTCACCATCT TTGGTCGTGA GACTCCGGTT GAGCTTACCA TGGACCAGAT TTCCTTGATA
GACTAG
 
Protein sequence
MAKRWYVVHT YSGYENKVKT DLEHRIETYG LERAVVDIQI PTEEVTEVKD GGKRETKESK 
VFPGYVLVRM ELDDNTWAVV RNTPGVTGFV GIDGKPVPLR RDEFDKIMRR GGMKTGSPVP
KRTATNIEVG QAIHVLSGPL ADFDGTVSEV NAESGKIKVM LTIFGRETPV ELTMDQISLI
D