Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1175 |
Symbol | |
ID | 8414048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1316360 |
End bp | 1316905 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 645022764 |
Product | NusG antitermination factor |
Protein accession | YP_003180194 |
Protein GI | 257784977 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000364949 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000228976 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCTAAGC GCTGGTATGT AGTTCACACC TATTCAGGTT ATGAAAACAA GGTAAAAACT GACCTTGAGC ACCGTATTGA GACCTATGGT CTTGAGCGTG CTGTTGTTGA TATTCAGATT CCTACTGAGG AAGTTACTGA AGTCAAGGAC GGCGGTAAGC GCGAGACCAA AGAATCTAAG GTTTTCCCAG GCTATGTTCT TGTTCGCATG GAGCTGGATG ACAATACGTG GGCTGTTGTT CGCAACACAC CAGGTGTAAC TGGTTTTGTT GGCATCGACG GTAAGCCAGT TCCTCTGCGT CGCGATGAGT TTGATAAGAT TATGCGTCGT GGCGGCATGA AGACAGGTAG CCCTGTACCT AAGCGTACAG CAACCAATAT TGAGGTCGGT CAGGCAATTC ATGTTCTTTC AGGTCCTCTT GCTGACTTTG ATGGCACTGT TTCTGAGGTC AATGCAGAGT CCGGCAAGAT TAAGGTTATG CTCACCATCT TTGGTCGTGA GACTCCGGTT GAGCTTACCA TGGACCAGAT TTCCTTGATA GACTAG
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Protein sequence | MAKRWYVVHT YSGYENKVKT DLEHRIETYG LERAVVDIQI PTEEVTEVKD GGKRETKESK VFPGYVLVRM ELDDNTWAVV RNTPGVTGFV GIDGKPVPLR RDEFDKIMRR GGMKTGSPVP KRTATNIEVG QAIHVLSGPL ADFDGTVSEV NAESGKIKVM LTIFGRETPV ELTMDQISLI D
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