Gene Apar_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1171 
Symbol 
ID8414044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1313500 
End bp1313880 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content56% 
IMG OID645022760 
Productribosomal protein L7/L12 
Protein accessionYP_003180190 
Protein GI257784973 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0222] Ribosomal protein L7/L12 
TIGRFAM ID[TIGR00855] ribosomal protein L7/L12 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000534348 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000277278 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCTGTCA CTAAAGATGA GATCATTGAG GCCCTTAAAG AGATGCCAGC ACTCGAGCTT 
TCTGAGCTCG TTCACGAGCT TGAGGACGTC TTCGGCGTTT CTGCTGCTGC TCCTGTAGCA
GTTGCTGCTG CTCCTGCAGC TGGTGGCGCT GCTGAGGCAG CAGAGGAGAA GTCTAACTTT
GACGTTATCC TCGAGGGCTT CGGCGACAAC AAGATTGGCG TCATCAAGGT TGTTCGTGCT
CTTACCAACC TTGGCCTCAA GGAGGCAAAG GAGGTCGTCG AGGGTGCTCC TAAGGCTGTC
CTCGAGGGCG CTAAGAAGGA GGACGCTGAG GCTGCTAAGG CTCAGCTCGA GGAGGCTGGT
GCTACCGTCA CCCTTAAGTA A
 
Protein sequence
MAVTKDEIIE ALKEMPALEL SELVHELEDV FGVSAAAPVA VAAAPAAGGA AEAAEEKSNF 
DVILEGFGDN KIGVIKVVRA LTNLGLKEAK EVVEGAPKAV LEGAKKEDAE AAKAQLEEAG
ATVTLK