Gene Apar_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1163 
Symbol 
ID8414036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1299954 
End bp1300262 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content50% 
IMG OID645022752 
Productribosomal protein S10 
Protein accessionYP_003180182 
Protein GI257784965 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000940072 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000509949 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCAAGCC AGAAGATCAG GATTCGCCTC AAGGGCTATG ATCACGAGGT CATTGATCAG 
TCCGCTAAGC TGATTGTTGA CACCGCACAG AAGACAGGTG CGCGTGTTTC CGGTCCTATC
CCTCTGCCAA CTGAGCGTAA TCTTTACACT GTTATTCGCT CACCACACAA GGATAAGGAT
TCCCGTGATC AGTTTGAGAT GCGCACTCAC AAGCGTCTCA TCGATATTCT CGACCCAAGC
GCTTCTACCG TTGATTCGCT TATGCGTCTC GACCTTCCAG CTGGTGTCGA TATCGAGATC
AAGCTCTAA
 
Protein sequence
MSSQKIRIRL KGYDHEVIDQ SAKLIVDTAQ KTGARVSGPI PLPTERNLYT VIRSPHKDKD 
SRDQFEMRTH KRLIDILDPS ASTVDSLMRL DLPAGVDIEI KL