| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1161 |
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| Symbol | |
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| ID | 8414034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1298338 |
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| End bp | 1298958 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645022750 |
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| Product | ribosomal protein L3 |
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| Protein accession | YP_003180180 |
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| Protein GI | 257784963 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000266904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000567921 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTAATA CCATCCTCGG CCGCAAGCTG GGCATGACCC AGGTATGGGA CGAGAACGAC
AACGTCGTTC CTGTTACCGT TGTTCTTGCT GGTCCCTGCA CCGTTTCGCA GGTAAAGACT
GTTGAAACGG ACGGCTACAA TGCCGTACAG ATTGGCTTTG GCGACATCTC CGAGAAGCAT
GTCAACAAGC CAATGGCTGG TCACTTCAAG GCACAGGGCG TCGAGCCAAT GCGTTACCTC
CGTGAGGTTC GCGTTGAGGA TGCTTCTGAG CACAAGACCG GCGATGTTGT CACAGTTGCT
GACTTCTCCG AGGTCACCAC TGTTGACGTA ACAGGCACTT CTAAGGGTAA GGGTTTCCAG
GGTACCGTTA AGCGCTGGAA CTTCTCTCGC GGTCCAATGA CTCACGGTTC TCGTAACCAG
CGTCGTCCAG GTTCCATTGG TCAGTGCGCA TACCCTGCAC GCGTTCGTAA GGGCCTTCAC
ATGTATGGTC ACATGGGCGC AGAGCGCGTT ACGGTCAAGA ACCTTAAGCT TGTCCGCGTT
GATGCTGAGC AGAACCTCAT GCTTATCAAG GGTGCTGTTC CTGGCGGCAA GAATGCCCTC
GTCCAGGTCC GCATGGCCTA A
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| Protein sequence | MVNTILGRKL GMTQVWDEND NVVPVTVVLA GPCTVSQVKT VETDGYNAVQ IGFGDISEKH
VNKPMAGHFK AQGVEPMRYL REVRVEDASE HKTGDVVTVA DFSEVTTVDV TGTSKGKGFQ
GTVKRWNFSR GPMTHGSRNQ RRPGSIGQCA YPARVRKGLH MYGHMGAERV TVKNLKLVRV
DAEQNLMLIK GAVPGGKNAL VQVRMA
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