Gene Apar_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1159 
Symbol 
ID8414032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1297373 
End bp1297672 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content46% 
IMG OID645022748 
ProductRibosomal protein L25/L23 
Protein accessionYP_003180178 
Protein GI257784961 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000025981 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000476583 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTCTC CTTATGAGGT CATCATTCGT CCTATCGTTT CAGAGCGTGC TTTCGATCTG 
ATGGAGCAGG GCAAGTACAC TTTTGAGGTT GCTCGTAACG CAGGTAAAGA AGAGATTGCT
GCAGCTGTAG AGAAGCTCTT CTCTGTACAC GTCACCAAGG TAAACACACT TTCTGTTAAG
CCAAAGAACA AGCGTGTACG TTATCAGCAG GCAGGTAAGA CTCGCCAGTG GAAGAAGGCT
ATTGTTACCC TCGCTGCTGG TGAGACTATC GAAATCTTCG GTAATAAGTC TGCTGAGTAA
 
Protein sequence
MNSPYEVIIR PIVSERAFDL MEQGKYTFEV ARNAGKEEIA AAVEKLFSVH VTKVNTLSVK 
PKNKRVRYQQ AGKTRQWKKA IVTLAAGETI EIFGNKSAE