Gene Apar_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1156 
Symbol 
ID8414029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1295739 
End bp1296101 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content53% 
IMG OID645022745 
Productribosomal protein L22 
Protein accessionYP_003180175 
Protein GI257784958 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01044] ribosomal protein L22, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000440865 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000562165 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTAAGA ATACCGATTC TATTGAGGTT CGCGCAACAG CTAAGTATGT TCGCGTTGCT 
CCTCGTAAGG CTCGCGCAGT TGTCGCGCTT GTCCGCGGTA AGTCTGTCGA GAAGGCCCTC
GAGGTTCTTC AGTTCTCGAC TCGCGCTGCC GCTACTGATG TTGCTAAGGT TCTGCGCTCC
GCAGTTGCTA ACGCCGAGAA CAACAATGGT CTCCGCGCTA ACAACTTGGT AGTCAAGACT
GCTTTTGTTG ACGAAGGCCC AACGCTTAAG CGTATTCGCC CTCGTGCAAA GGGTTCGGCT
TCTCGCATTA ATAAGCGCAT GAGCCACATT ACCGTTGTCG TTGCACCTCG AAAGGAGGCG
TAG
 
Protein sequence
MAKNTDSIEV RATAKYVRVA PRKARAVVAL VRGKSVEKAL EVLQFSTRAA ATDVAKVLRS 
AVANAENNNG LRANNLVVKT AFVDEGPTLK RIRPRAKGSA SRINKRMSHI TVVVAPRKEA