Gene Apar_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1152 
Symbol 
ID8414025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1294102 
End bp1294368 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content52% 
IMG OID645022741 
Productribosomal protein S17 
Protein accessionYP_003180171 
Protein GI257784954 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0186] Ribosomal protein S17 
TIGRFAM ID[TIGR03635] 30S ribosomal protein S17 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000241067 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000026776 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGAGA CCGAAAGCAG AAATGCGCGT AAGGTTCGTA CCGGACTCGT CGTCTCCATC 
TCTGGCGAGA AGACGATTAC GGTAGAGATT ACTTACCGTA AGCACCACCC TAAGTATGGC
AAGATGATGA CCATCGGCAA GAAGCTTCAC GTTCATGATG AGAACAACGA GGCTGGTCTG
GGCGATACCG TCCGTGTCAT GGAGACTCGT CCTCTTTCCA AGACCAAGCG TTGGCGTCTC
GCAGAGATCG TTGAGCGCGC TAAGTAA
 
Protein sequence
MAETESRNAR KVRTGLVVSI SGEKTITVEI TYRKHHPKYG KMMTIGKKLH VHDENNEAGL 
GDTVRVMETR PLSKTKRWRL AEIVERAK