Gene Apar_1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1145 
Symbol 
ID8414018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1290630 
End bp1290998 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content55% 
IMG OID645022734 
Productribosomal protein L18 
Protein accessionYP_003180164 
Protein GI257784947 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0256] Ribosomal protein L18 
TIGRFAM ID[TIGR00060] ribosomal protein L18, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.49459e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0107289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC AGCAGGCGAA AAAGGCGGGT CTTGAACGCC GCAAGCGCCG CGTACGTGCC 
AAGGTCTTTG GTACATCTGA GCGTCCGCGT CTTGCAGTTC ACCGTTCAAA CGCAAACATT
TATGCACAGC TTATTGACGA CGCTTCTGGA AGAACTCTCT GCTCTGCCTC TACGCTTGAC
CCAGAGTTCC GTTCTACTGG CAAGGTTGGC TCCAACAAGG AGGCAGCTGA GTTCGTAGGT
GAGCTTATCG GTAAGCGCGC TGCCGAGAAG AACGTCACTG AGGTCACTTT TGACCGTGGT
GGTCGTCTTT ATCACGGCCG CGTTAAGGCT TTGGCAGATG GCGCCCGCAA CGCGGGCCTG
AAGTTCTAG
 
Protein sequence
MKKQQAKKAG LERRKRRVRA KVFGTSERPR LAVHRSNANI YAQLIDDASG RTLCSASTLD 
PEFRSTGKVG SNKEAAEFVG ELIGKRAAEK NVTEVTFDRG GRLYHGRVKA LADGARNAGL
KF