Gene Apar_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1144 
Symbol 
ID8414017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1290099 
End bp1290620 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content52% 
IMG OID645022733 
Productribosomal protein S5 
Protein accessionYP_003180163 
Protein GI257784946 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.88101e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0120151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTG ATCGTAAGCG CCAGCAGGAT ACGGATCTTC AGGAGCGCGT CGTTTATATT 
CACCGCGTTT CCAAGACCGT TAAGGGTGGC CGCCGTATGT CACTCGTTGC TCTGGTAGTT
GTTGGCGACG GTAAGGGTAA CGTTGGTATT GGCCAGGGTC GTTCCGCTGA GGTACCTCTG
GCAATTCAGA AGGGCGTCGA GGACGCAAAG AGGAACATGT TTAAGGTTCC ATTGACCGAG
ACTGGTTCCG TACCACATGC AGTTACTGGT CGCTATGGTG CAGGTTCTGT TCTTATTAAG
CCTGCATTCG AGGGTACTGG TGTTATTGCT GGCGGTCCTA TTCGTCCACT CTTCGAGCTT
GCAGGTATCA CCAATGTACT TTCTAAGTCT CTTGGTACCG ACAACGCTCT GAACATGATT
AAGGCAGCAG CTGAGGGTCT GAAGGAGCTT TCCAGCCCAG AAGAAGCAGC TGAGCGTCGT
GGTCTAACCG TCGGCGATAT GTTCGTCGGA AAGGAGAACT AA
 
Protein sequence
MARDRKRQQD TDLQERVVYI HRVSKTVKGG RRMSLVALVV VGDGKGNVGI GQGRSAEVPL 
AIQKGVEDAK RNMFKVPLTE TGSVPHAVTG RYGAGSVLIK PAFEGTGVIA GGPIRPLFEL
AGITNVLSKS LGTDNALNMI KAAAEGLKEL SSPEEAAERR GLTVGDMFVG KEN