Gene Apar_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1143 
Symbol 
ID8414016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1289911 
End bp1290096 
Gene Length186 bp 
Protein Length61 aa 
Translation table11 
GC content53% 
IMG OID645022732 
Productribosomal protein L30 
Protein accessionYP_003180162 
Protein GI257784945 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.5708e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0109898 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGA ACCTTAGCAT CAAGCTTGTC CGTGGCGCTG TTGCAGGCGT CAAGAAGGAC 
CAGACTGCTA CGGTGAAGGC CCTCGGCCTC CACAAGATCG GCGATACCGT CGAGCAGCCT
GATAACCCAA GCATTCGTGG AATGATCTTC AAGGTTAAGC ACCTTGTCGA GGTTGAAGAG
AACTAG
 
Protein sequence
MAKNLSIKLV RGAVAGVKKD QTATVKALGL HKIGDTVEQP DNPSIRGMIF KVKHLVEVEE 
N