| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1143 |
|---|
| Symbol | |
|---|
| ID | 8414016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | - |
|---|
| Start bp | 1289911 |
|---|
| End bp | 1290096 |
|---|
| Gene Length | 186 bp |
|---|
| Protein Length | 61 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 645022732 |
|---|
| Product | ribosomal protein L30 |
|---|
| Protein accession | YP_003180162 |
|---|
| Protein GI | 257784945 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1841] Ribosomal protein L30/L7E |
|---|
| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000025708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0109898 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGA ACCTTAGCAT CAAGCTTGTC CGTGGCGCTG TTGCAGGCGT CAAGAAGGAC
CAGACTGCTA CGGTGAAGGC CCTCGGCCTC CACAAGATCG GCGATACCGT CGAGCAGCCT
GATAACCCAA GCATTCGTGG AATGATCTTC AAGGTTAAGC ACCTTGTCGA GGTTGAAGAG
AACTAG
|
|---|
| Protein sequence | MAKNLSIKLV RGAVAGVKKD QTATVKALGL HKIGDTVEQP DNPSIRGMIF KVKHLVEVEE
N
|
|---|
| |