Gene Apar_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1142 
Symbol 
ID8414015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1289453 
End bp1289899 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content54% 
IMG OID645022731 
Productribosomal protein L15 
Protein accessionYP_003180161 
Protein GI257784944 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0200] Ribosomal protein L15 
TIGRFAM ID[TIGR01071] ribosomal protein L15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.49259e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0114538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTCA ATGATCTTCG CCCCGCAGTG GGTTCGCGCA AAAATCGTAA GCGCGTAGGT 
CGCGGTAATT CTTCAGGCAA TGGTACTTTT GCCGGCCGCG GTATGAATGG TCAGCTCTCC
CGCTCTGGTG GCGGTAAGGG CGCTGGCTTC GAGGGTGGAC AGCAGCCACT GGCTATGCGT
CTTCCTAAGC TTCCTGGTTT TACTAACCAC AACCGTGTTG AGTACGCTCC AGTCAACGTT
GCTCGTCTGA ATGCTCTTTT TGCAGACGGC GAGACCGTAG ACGCAGATAC TCTGGTTGCT
AAGGGAGTTA TTAAGTACAA CTACATCCCA GTCAAGGTTC TGGGCGACGG CGAGCTTTCT
AAGAAGCTTA CTGTTAAGGT CGACAAGGTT TCCGCCTCTG CAAAGGCTAA GATCGAGGCG
GCCGGTGGAA AGGTTGAGGC CGAGTAG
 
Protein sequence
MQLNDLRPAV GSRKNRKRVG RGNSSGNGTF AGRGMNGQLS RSGGGKGAGF EGGQQPLAMR 
LPKLPGFTNH NRVEYAPVNV ARLNALFADG ETVDADTLVA KGVIKYNYIP VKVLGDGELS
KKLTVKVDKV SASAKAKIEA AGGKVEAE