Gene Apar_1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1139 
Symbol 
ID8414012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1286694 
End bp1287482 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content46% 
IMG OID645022728 
Productmethionine aminopeptidase, type I 
Protein accessionYP_003180158 
Protein GI257784941 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.63177e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0264901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACAA TAAAAACACC TGAACAAATC GAGGCTATGA AGGTGTCGGG TGCTCTTTCT 
AAGGCAGCTC TTCGCCGTGC TGGATCCATG ATTAGACCTG GTGTTTCAAC GCTCGAAATT
GACCGCGCTG TCGAAGCTTT TATTAAACTT CATGGCGGAA CACCTACTTT TAAAGGTTAT
GGCGGATTTC CTGGATCTGT TTGTTCTTCT ATTAATGAAC AGATTGTTCA CGGTATTCCA
TCAGCTAACG TCATTTTGCA AGATGGCGAT ATTCTGACCA TTGATACTGG TGCTACCGTT
AACGGTTGGG CGGGAGATAA CGCTTGGACG TTCTACTGTG GAACAGTTGA CGAGAAAACC
CAGGCACTTT GTGAGGTTAC ACGCGATTGC CTTAAAGCAG GTATTGCAGC TGCTGTTCCA
GGCGCTCGCC TTGGTGATGT AGGACATGCA GTCCAAAAGC TTGCAGAAGA TAATGGCTAT
GGCGTCATTC GTGATTTTGT TGGTCATGGT ATTGGTCGTA ATCTTCATGA GGATCCAGAG
GTCAGAAACT ATGGCCGTGC AGGTAATGGA ATTGTTCTTC GTGAGGGAAT GGTAATTGCA
ATTGAGCCAA TGATTGCCAT GGGTACTTAC GATTGTACTG TTCTTGAAAA TGGTTGGACC
GTTGTCACTG ACGATGGCTT GCCATCTGCG CATTATGAGA ACACTGTTGC TATTACTGCC
GATGGACCTG TTATCGTCTC AGAGGACGAG GTCGGTCCAT GGTGTGAGAT GCAAGGTGGA
CTTGAGTAA
 
Protein sequence
MITIKTPEQI EAMKVSGALS KAALRRAGSM IRPGVSTLEI DRAVEAFIKL HGGTPTFKGY 
GGFPGSVCSS INEQIVHGIP SANVILQDGD ILTIDTGATV NGWAGDNAWT FYCGTVDEKT
QALCEVTRDC LKAGIAAAVP GARLGDVGHA VQKLAEDNGY GVIRDFVGHG IGRNLHEDPE
VRNYGRAGNG IVLREGMVIA IEPMIAMGTY DCTVLENGWT VVTDDGLPSA HYENTVAITA
DGPVIVSEDE VGPWCEMQGG LE