| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1125 |
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| Symbol | |
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| ID | 8413998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1275228 |
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| End bp | 1276217 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022714 |
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| Product | glycosyl transferase family 2 |
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| Protein accession | YP_003180144 |
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| Protein GI | 257784927 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTA CTGCTCTTGT CATAGTTACC TTTAAACGTC AGGAATTGCT TTCCAACCTG
CTTAATTCCA TCGCTAAGCT CACACAGGCA CCGTGGCGCA TCATTGTTGT GGATAACGAG
AATTCCTCTG AGACAGCCGC GCTTGTGTCT GAGTTTTCCA AGAAGGTTAA AACCTTGTGG
GGAGAAACAA CTGACGATCC TGATATTTAC GGCGGTACCA ATCGCGTGTG TTACGTGCCT
ATGGAGCAAA ATACCGGTGG TTCCGGTGGA TTCTCTGAAG GCGTTCGCGT AGGTTATGAG
TTAGGCGCCG AGTGGTTTTG GGTTATGGAT GATGATGTTG CCGTGCTGCC TGATGGTCTT
GATAAGCTCG ACGCATGGTC AGACAAGGCT GAGGTTATCC AAGGCCAGCG CTACGACTTT
GACGGCGGTC CTTTCTTCTG GCAGTACCGT TTTAGCACTG CACTAGGTAT TTACAATCCA
TTGGCAAAGG CTGGTTTTGA TGGCGTTTCC TACCGTGAGT GCAATGTTAT GTGCTTTGAG
GGTGCTTGCT TTAAGCGTTC AGTAGTACAA AAGATTGGTC TGCCTGATGC GCGCTTCTTT
ATCTATTGGG ATGATGCTTT GTATGGTTAT TTGGCCAGTA AGGTGACTCA GCCCATTTTG
ATTCCAGACT TTGTTCTTTC AAGATGTCGA GAAGTTCCTG GTCAGAGTAT TGGTTCTGTA
CGCCAACTTA ATTCAACTTC TGATATGACG CGCTATTACA TCACGCGTAA TCGCGGTTAT
ATTGCCCGTT ACTTCCAGGT TCATGGTGAT TACAATCCCG TGCTTTTTGG CGTCGGCACA
GCACTAACCT TTGCAAAAGA GATTATTCGA CTCATTTTGG TAGATAGAGC GCACTTCTCG
TCTGGTTTTT CTCGTCTTAT TAAGGGCTGG AAGGATGCGC GTCTTATCTA TAAGGATGTA
ACGTGGCGTC CGCAGCCTCC TCTAGACTAG
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| Protein sequence | MKRTALVIVT FKRQELLSNL LNSIAKLTQA PWRIIVVDNE NSSETAALVS EFSKKVKTLW
GETTDDPDIY GGTNRVCYVP MEQNTGGSGG FSEGVRVGYE LGAEWFWVMD DDVAVLPDGL
DKLDAWSDKA EVIQGQRYDF DGGPFFWQYR FSTALGIYNP LAKAGFDGVS YRECNVMCFE
GACFKRSVVQ KIGLPDARFF IYWDDALYGY LASKVTQPIL IPDFVLSRCR EVPGQSIGSV
RQLNSTSDMT RYYITRNRGY IARYFQVHGD YNPVLFGVGT ALTFAKEIIR LILVDRAHFS
SGFSRLIKGW KDARLIYKDV TWRPQPPLD
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