| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1124 |
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| Symbol | |
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| ID | 8413997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1272582 |
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| End bp | 1274804 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022713 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_003180143 |
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| Protein GI | 257784926 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTA TCAAGCGCAA TGGCTCAGAG GTCACCTTCG AGGTTGAGAA GATTGTTAAC
GCAATCGCTA AGGCTAACGC AGAGGTCCCT GAGGATCAGC GCCTGACTGA GCGTGAGATT
CAGTTTGCTT CCCTTAACGT TACCGATGAG TGTGAGAAGG CTGGACACAC CGTTACCGTC
GAGGAGGTCC AGGACCTTGT CGAGGATCAG CTCATGGCTC TTGACCGCTT TGAGGTTGCT
CGTAAGTACA TCATTTACCG CTACATCCAG AACCAGAAGC GTCACAAGAA CACCACCGAT
GACAAGATTC TGTCTCTGAT TGAGTGCAAC AACGAGGAAG TCAAGCAGGA GAACTCCAAC
AAGAACCCTA CCGTTGTTTC CGTTCAGCGT GACTACATGG CTGGTGAGGT TTCTAAGGAC
CTCGTTCAGC GTGAGCTCCT TCCAGAGGAT ATTGTTGCTG CTCACAACGA GGGTCTTATC
CACTTCCACG ATTCCGATTA CTTTGCACAG CACATGCACA ACTGTGACCT CATTAACCTT
GATGACATGC TGCAGAACGG TACTGTTATC TCTGGCACTC TGATTGAGCG TCCACATAGC
TTCTCTACTG CATGCAACAT TGCAACTCAA ATCATTGCTC AGGTAGCATC CTGTCAGTAC
GGTGGTCAGT CCATCTCCTT GGCTCACCTT GCTCCTTTTG TTGATGTTTC TCGTAAGAAG
ATTCGCAAGA CCGTTATGGA GGAGATGAAC TCCGTCGGTG TTGAGCTTTC TGCTGAACAG
CTCAACGAGA TGGTTGAGAA GCGCCTTCGT GACGAGGTTT CTCGTGGCGT TCAGACCATT
CAGTACCAGG TTGTCACCCT TATGACCACC AACGGCCAGG CTCCTTTTAT TACCGTCTTC
ATGTATCTCA ACGAGGCAAA GAATGATCAG GAGAAGAAGG ACCTTGCACT CATCATTGAA
GAGATGCTTC GTCAGCGTTA TCAGGGCGTA AAGAATGAGG AGGGTGTCTG GATTACTCCT
GCATTCCCTA AGCTCATCTA TGTTCTTGAA GAGGACAACG TTTACGAGGA TTCTAAGTAC
TACTACCTCA CTCAGATGGC TGCAAAGTGC ACCGCTCGCC GTCTTGTCCC TGACTACATC
TCTGAGAAGA AGATGAAGGA GTACAAGCTT TCTAAGGGCG AGAAGGAAGG CGAGGGCGAT
ACCTTCACTT GCATGGGTTG CCGTTCCTTC CTGACTCCAG ACCGCTCTGG TAATGGTTTC
AACAATGTTG CTCGTGCAAA GAACTATGAG CCAGGTAAGC CTAAGTACTA CGGTCGTTTC
AATCAGGGTG TTGTAACCAT TAACCTTCCT GACGTTGCTC TTTCTGCTGG CCGTGATATG
GACAAGTTCT GGAAGATCTT CGATGAGCGT CTTGAACTTT GCCACCGCGC ACTTCGCGCT
CGTCATGATC GTCTGAAGGG CACTTTGTCT GACGCCGCAC CTATCCTTTG GCAGTACGGT
GCACTTGCTC GTTTAGATAA GGGTGAGGTT ATTGATCCTT TGCTTTACGG CGGATATTCC
ACCATCTCCC TTGGTTATGC AGGCCTGTAC GAGTGCGTTA AGGCTATGAC TGGTCACAGC
CACACCGACA AAGAGGCAAC TCCATTTGCA CTTCAGGTTA TGCAGCACAT GAACGATAAG
TGCACTGAGT GGAAGGAAGC AGAGGATATC GATTACTCCC TTTACGGAAC TCCTCTTGAG
TCCACCACCT ACAAGTTTGC TAAGGCACTT CAGCGTCGCT TTGGTGTTAT CCCTGGCATT
ACTGATAAGG GCTACATCAC CAACAGCTAC CACGTCCACG TTGCAGAAGA GATTGACGCA
TTCCAGAAGC TTCAGTTTGA GTCTGAGTTC CAGCGTCTTT CCCCAGGTGG AGCAATCTCT
TACGTTGAGG TTCCTAATAT GCAGGATAAC ATCGAGGCTG TTCTTAGTGT CATGCAGTTC
ATCTATGAAC ACATCATGTA TGCAGAGCTT AACACCAAGT CTGACTTCTG CCAGGAGTGT
GGTTATGACG GTGAGATTCA GATTGTTGAG GAGGATGGCA AACTGGTTTG GGAGTGCCCA
CACTGTGGTA ACCGTGACCA GACCAAGATG AATGTTGCTC GTCGTACCTG CGGCTACATT
GGCACCCAGT TCTGGAACCA GGGCCGTACC CAGGAGATCA AGGATCGCGT CCTTCACCTC
TAA
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| Protein sequence | MKIIKRNGSE VTFEVEKIVN AIAKANAEVP EDQRLTEREI QFASLNVTDE CEKAGHTVTV
EEVQDLVEDQ LMALDRFEVA RKYIIYRYIQ NQKRHKNTTD DKILSLIECN NEEVKQENSN
KNPTVVSVQR DYMAGEVSKD LVQRELLPED IVAAHNEGLI HFHDSDYFAQ HMHNCDLINL
DDMLQNGTVI SGTLIERPHS FSTACNIATQ IIAQVASCQY GGQSISLAHL APFVDVSRKK
IRKTVMEEMN SVGVELSAEQ LNEMVEKRLR DEVSRGVQTI QYQVVTLMTT NGQAPFITVF
MYLNEAKNDQ EKKDLALIIE EMLRQRYQGV KNEEGVWITP AFPKLIYVLE EDNVYEDSKY
YYLTQMAAKC TARRLVPDYI SEKKMKEYKL SKGEKEGEGD TFTCMGCRSF LTPDRSGNGF
NNVARAKNYE PGKPKYYGRF NQGVVTINLP DVALSAGRDM DKFWKIFDER LELCHRALRA
RHDRLKGTLS DAAPILWQYG ALARLDKGEV IDPLLYGGYS TISLGYAGLY ECVKAMTGHS
HTDKEATPFA LQVMQHMNDK CTEWKEAEDI DYSLYGTPLE STTYKFAKAL QRRFGVIPGI
TDKGYITNSY HVHVAEEIDA FQKLQFESEF QRLSPGGAIS YVEVPNMQDN IEAVLSVMQF
IYEHIMYAEL NTKSDFCQEC GYDGEIQIVE EDGKLVWECP HCGNRDQTKM NVARRTCGYI
GTQFWNQGRT QEIKDRVLHL
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