Gene Apar_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_1122 
Symbol 
ID8413995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp1270913 
End bp1271854 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content40% 
IMG OID645022711 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003180141 
Protein GI257784924 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCATCTC CAACTCATAC ACCCTCTCAT ATTCTTACAC ACAATTCCTC GCAGACACTC 
ATCTGGAAGG GCGCCCTTCT ATTTTGTGCC CTTGTGTGGG GAGGCTCTTT TGTAGTCATC
AAAGATGCAA TTAACTTTAT CCCTACTGCC TGGTTGATGA CTTTAAGATT TGTACTTTCT
GTTGTTGTGG TTGGAATCAT CTTTAGAAAA AGACTTAAAG AGAATCTTGA TATCAGACAC
CTTACATTTG GTGCACTCTT AGGAATTCTA AATGGCTTTG GATTTCTTTT TCAAAACGGA
GCACTTGCCT ACACTACAGC GGGTAAAACA GCCTTTATCG CTTCTATCTA TTGTGCAATG
ATTCCGTTTG TCAATTGGCT CATTGCAAAA AAGAAACCCC ACATCTCCAG TATCATTGCT
GCCTGTATGT GTGTTGCAGG AATTGGTCTT ATCTCACTTG GAACAGACTT CTCATTTTCC
TTTGGTATCG GCGAACAAAT GGCTCTCATA TCAGCAATTA TTTTTGCATT TGTTTTTGTA
CTTACTGCAG AACTTTCACA CAAACTTGAC ATCATTACAC TTACCATAGT TCAGCTTGGT
GTAAGCACCC TTCCTTGTCT AGGTTGGGCT CTCTGTTGTG AAACTATGCC AAACTTTTCT
CAAATTCCTT CTACTGCATG GATGGCGCTT GCATATATCA TTTTTATTGC AACCGCTCTT
ACTGGCGTAC TACAAAATCG ATCACAGAAA TCTGTCTCTC CTGTTCAAGC ATCACTTATC
ATCTCTTTGG ATACCATCTT TGCAGCAGTT TTTGGTGTCA TCTTCCTTGC AGAAATTATT
ACTCCCACAA TTTTCCTTGG CTTCATTGTT ATCTTTGTTG CAATCTTTAT CAGTGAACTT
GGCGAGAAAC CCGCAGAACC TCAAACCACC TCAGAAAGCT AA
 
Protein sequence
MSSPTHTPSH ILTHNSSQTL IWKGALLFCA LVWGGSFVVI KDAINFIPTA WLMTLRFVLS 
VVVVGIIFRK RLKENLDIRH LTFGALLGIL NGFGFLFQNG ALAYTTAGKT AFIASIYCAM
IPFVNWLIAK KKPHISSIIA ACMCVAGIGL ISLGTDFSFS FGIGEQMALI SAIIFAFVFV
LTAELSHKLD IITLTIVQLG VSTLPCLGWA LCCETMPNFS QIPSTAWMAL AYIIFIATAL
TGVLQNRSQK SVSPVQASLI ISLDTIFAAV FGVIFLAEII TPTIFLGFIV IFVAIFISEL
GEKPAEPQTT SES