Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_1095 |
Symbol | |
ID | 8413968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 1239705 |
End bp | 1240328 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 645022684 |
Product | sec-independent translocation protein mttA/Hcf106 |
Protein accession | YP_003180114 |
Protein GI | 257784897 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1826] Sec-independent protein secretion pathway components |
TIGRFAM ID | [TIGR01411] twin arginine-targeting protein translocase, TatA/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTGGCA TTGGAGAAAC GGAGCTCGTA CTAATTTTGC TCTTTGCATT TTTAGTATTT GGTCCTGATA AATTACCTGG TATGGGTCGC ACGCTTGGCC GTGCTTTAAG GCAGTTCCAG AATGCTCAAG AGGGCTTTAA TAAAGTTGTC CGTGCGGACT TACTTGATCC TGCAGCGGAT GCACTTCACG AGAAGCCCAA GCGCTCCGAG CAGTTAAAAA ATGCTGCATC TGATGCTGAT CGCGAGGATA CTGATCACCA GGAAACCTTT GCTGAGCGTC GTGCTCGCCT AAAAGAGGAG CGTGAGGCAG CCGAGAGGGC TGCTGTCGAG GCAGCCGAGC AGAACAAGCA GGCTGAGACG GTCGAGAAGA CCGAGCAACC AGAAGCCGTT TCTGATAAGG AGACTGCTAC AGCTGGACCA GAAGCCACTT CTTCTGTTAA CTTCTCCGGT GATTCCGCAG AGGCAACTGA ACAGATAACA CCTAAGGCTA CAGAAGAAAC TCCTGCAGCC GCTCTATCTG CAAAAGACTT GTATAACCTT GGATCTGCAC GTTCTTCTCG CTCTATGGCA GAAGATAAGA AAGAAGAAGT TGCTGGAGAG GAGGGAGAAA GTCAGGACGC ATAA
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Protein sequence | MFGIGETELV LILLFAFLVF GPDKLPGMGR TLGRALRQFQ NAQEGFNKVV RADLLDPAAD ALHEKPKRSE QLKNAASDAD REDTDHQETF AERRARLKEE REAAERAAVE AAEQNKQAET VEKTEQPEAV SDKETATAGP EATSSVNFSG DSAEATEQIT PKATEETPAA ALSAKDLYNL GSARSSRSMA EDKKEEVAGE EGESQDA
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