| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1076 |
|---|
| Symbol | |
|---|
| ID | 8413949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | - |
|---|
| Start bp | 1218304 |
|---|
| End bp | 1219365 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 645022665 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003180095 |
|---|
| Protein GI | 257784878 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAGAG TCACTAAGGC AATTCTTCAC GTCTTTGATT TTGAGACGGG AACTAAATAC
TTCTCTCAAT CTACCTTGGA TTTGGAGGAC CGTCAGACAA AGTCATATGT ACAGCGTAGA
CTGCGTAAGG TTACGGCAAA CCCAGAGTCT AGACATGGAG AATTTGCCCC TACCAGTAAT
TTTGCTGGCG GTCTTCAGGA ATACGCACAC GGAGACGTTG AGTTTGTAGA GTTTTCTTGC
CAGATTGCCC AGTGGTTCTG GGAACAGCTT CGTCGTGCAG ATGACGTTGA GCAGTGTGAT
CTTCTTGTGG CTGATTACAT TGATACTGAT GCAGGTCAAG CGCTTGCTAG CAGTGCTGTA
AATGATGAGG ATGCTCAGGC TGAGGCATTT GAGGGTGAGG GAAGACGACT CTTTGCCATT
GTGCTTCTCC CACGCAAGCA AGCCTTTATA CATGATGTTA ATGGCTCATC AAACGAGATT
TTACGTCAAG ATGCAACGCT GCCATCGCCT ACGCAAAAAG TTGACTCGTA TGCAGTCATT
GACTTAGATA CGGGCGCTAT TGATTTCCAC GATCATGATC GTTCTGTAGC AGGAGAAGGA
AAGTTTATTA TTCCCGAGTT GTTTCTTGAG TGCAGTTCAG AGGCATCAAG CCATGAGGTT
ATTGGCGAGG TAACCGTTAT TGTTCAGGAT TTGGCAGAAG AGTATGGTCT TGAGCCTGCC
GTTGAGGTGT CTCGCGCTAA GGCTGCCGTT GCGGAAGCAG CAGAGGTAGA AGAGGTAGTA
GATCCCATCA AGGTTGGTAA GCGCATCTTT GAAGAGCGTC CTGAGATTCA GGAAAAGTAC
GAAGCTCAGG TGGTAAGTAG AGAGCTTCCA GAAGAAGTTC CTGTTAAACG CGGTGTTGCT
AACAGGATTG CGAAGAATCA TAAGATTCGA ACAGATACAG GAATTGAGAT TTCATTTCCT
TCAAACCTAA CAGATCGTCC AGGTTACTTA GAATTTTCTC ATGAGTCTGA CGGTAGGATT
ACCATTTCAA TTAAAAATGT TGCACATATT GAGAACCGCT AA
|
|---|
| Protein sequence | MLRVTKAILH VFDFETGTKY FSQSTLDLED RQTKSYVQRR LRKVTANPES RHGEFAPTSN
FAGGLQEYAH GDVEFVEFSC QIAQWFWEQL RRADDVEQCD LLVADYIDTD AGQALASSAV
NDEDAQAEAF EGEGRRLFAI VLLPRKQAFI HDVNGSSNEI LRQDATLPSP TQKVDSYAVI
DLDTGAIDFH DHDRSVAGEG KFIIPELFLE CSSEASSHEV IGEVTVIVQD LAEEYGLEPA
VEVSRAKAAV AEAAEVEEVV DPIKVGKRIF EERPEIQEKY EAQVVSRELP EEVPVKRGVA
NRIAKNHKIR TDTGIEISFP SNLTDRPGYL EFSHESDGRI TISIKNVAHI ENR
|
|---|
| |