| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1038 |
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| Symbol | |
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| ID | 8413911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1170480 |
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| End bp | 1173164 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022627 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_003180057 |
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| Protein GI | 257784840 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.615949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGAAT ATCTTTCAAG TGCGGCTGAT GTTATCAGTG CGCAAAAAAC TGATGCCGAA
ATTGGTCTGT CTGATGCAGA AGCAGTTTCG CGTCTTGAGG CTCATGGTCT TAATAAGCTT
AAAGAAGCGC CAAAAGAATC AATTATTAAA AGGTTCTTTG CACAGATGGC TGATCCTATG
GTCATTATGC TTCTTGTTGC TGCTGCTATT TCTGCTGCTG AAGGAATTTA TACCGGGGAA
GGCGGAGTTG CAGACGTCGT TATTATTCTG TTTGTCGTTG TCGTCAATTC TGTTCTTGGT
GTTGTCCAGG AAGGCAAAGC CGAAGAAGCT CTTGCTGCTC TGCAAGAGAT GAGTGCAGCT
CAGAGTAAGG TTATTAGAGA TGGTCGTCTT AAGACAGTTG TCTCAACTGA GCTTGTTGTG
GGCGATATTA TTCTGCTTGA GGCAGGTGAT TCTGTTCCCG CTGATTGTCG CATTCTTGAG
AGTGCTTCTA TGAAGGTAGA GGAATCAGCA CTGACAGGTG AATCAGTTCC TGTCGAGAAA
CACGCTGAGA TTCTCAGTCT TGCTGAAGAT ACAGATGATA TTCCTTTGGG CGATCGAAAG
AATATGTGCT ATTCCGGATC TATTGTGGTC TATGGCCGTG GTCGTGCAGT TGTTGTTGCA
ACAGGCATGG ACACCGAGAT GGGTAAGATT GCAGACGCAA TTGCTCAGGC AGAGGATGGA
CAGACTCCAC TTCAGATTGC TCTTGATAAG CTTTCACACA CACTAACTAT TCTTGTTGTT
GTCATCTCAT TGCTTGTTTT TGCAACAGGT TTCATCAAGC ACGGCGCTGA GATGCTGGGT
AATTTTGACC TTGTTTTAAG TACGTTTATG GTTGCAGTTT CTCTTGCAGT AGCCGCAATC
CCAGAGGGCC TTGTTGCCGT TGTTACTATT GTTCTTTCTA TGGGCGTAAC TAGAATGAGC
GAGCGCCACG CTATTGTTCG TCGTCTTACT GCTGTTGAGA CCCTTGGTTG TACTCAGGTT
ATTTGCTCTG ATAAGACAGG TACTCTGACT CAGAATAAGA TGACTGTTGT TCGTCATGAG
ACAGAAAATC TTGACGCACA TGTACGTACC ATGGCGCTGT GCTCCGATGC TACTTGGGAT
GATATAGAGC AGGTAGCAAA AGGTGAGCCA ACTGAGGCAG CTCTTGTTGC AGATGCCGCA
AAACTTGGAT ACACCACAAG TGACTTAGCT TCTTCTCGCC CTCGTATTGG TGAGGCACCT
TTTGATTCTT CTCGTAAGAT GATGTCTGTT GTGGTGCGTA CACGTTCTGG TAAGGTTGTA
CAGCACACTA AGGGTGCACC TGACGAGGTG CTTGCTCGTT GTACCAAGAT TATGACAAGC
GACGGCATTG TTGACCTTAC CGATGAGGCT CGCTCTGAGA TTTTGGCTCA GAACAAGTCC
ATGGCTGATC AGGCTCTTCG CGTTATGGCG TCTGCTCGCC GTGATTGGGG AACAGAAGCT
CCTCAAAGTT ATGATCCAGC TACCCTAGAG CATGATATGG TCTTTGTTGG ACTCTCTGGC
ATGATTGATC CGGTTCGTCC TGAGGTTAAG AGCGCTGTTG CAGAGGCTCA TGAAGCTGGC
ATGCGCACCG TTATGATTAC GGGTGACCAC ATTGATACAG CCGTTGCTAT TGCAATTGAG
CTGGGCATTA TTGCTGATCG TTCTCAGGCA ATTACGGGTG CGCAGCTTGA TAAGATTTCT
GATGAAGAGT TTGAGCAGCG TATTGAGACA ATTGGTGTTT ATGCACGCGT TCAGCCTGAG
CACAAGGTTC GCATTGTTGA TACTTGGCGC AAGAAGGGCA TGGTTACAGC CATGACTGGC
GACGGTGTTA ACGATGCCCC TTCCATTAAG CGTGCTGATA TTGGTATTGG TATGGGTATT
ACTGGTACCG ACGTTACCAA GGGCGTTGCA GATATGGTTC TTGCTGACGA TAACTTTGCC
ACCATCATTA GCGCATGCGA AGAGGGAAGA CGCATCTACG ACAACATTCG TAAGTGCATC
CAGTTCCTCT TGAGCTCCAA CCTTGCAGAG GTTATTTCCG TCTTTATTGC ATCCCTAGTT
GGCTTTACTA TTCTTCAGCC TACCCACCTT CTGTGGATTA ACCTGATCAC CGACTCTCTG
CCTGCGCTTG CTATGGCTAC CGAGAAGGCA GAACCAGGAA TCATGAAGCG TAAGCCACGT
AATCCTAAGG ACGGAATCTT TGCGGGCGGC GTTGGCTTTG ACTGCCTTGT TCAAGGTTCT
ATCATTGCTC TTCTCACCCT TGCCAGCTAT TTTATTGGTC ACTACTTTGA GTATGGAACC
TTTGATATCT CACAGGTTAT TATTAACCCA GAGGCTGGCG TTGAGGGTAT GACCATGGCG
TTCTTGACGC TTTCTATGGT TGAGATGTTC CACTCCTTCA ACATGCGTTC TCTGCGTGGT
TCCATCTTCA AGCTAACTAG TCACAACATT TGGCTGTGGG GCTCCTTTGT AATGTCTTTG
ATTCTTACCT TTGTGGTTAT TGAGACACCA CTTTCTCAGG CGTTTGGCTT TGCTGAGATT
GGTTTTAAAG AGTACGCCAT GGCAATGCTT TTAGCTGCAT CTATTATTCC TTTGATGGAG
CTGTACAAGG CTGTTATGCG TTCTGTGCAG AAGAACAAAG CATAA
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| Protein sequence | MKEYLSSAAD VISAQKTDAE IGLSDAEAVS RLEAHGLNKL KEAPKESIIK RFFAQMADPM
VIMLLVAAAI SAAEGIYTGE GGVADVVIIL FVVVVNSVLG VVQEGKAEEA LAALQEMSAA
QSKVIRDGRL KTVVSTELVV GDIILLEAGD SVPADCRILE SASMKVEESA LTGESVPVEK
HAEILSLAED TDDIPLGDRK NMCYSGSIVV YGRGRAVVVA TGMDTEMGKI ADAIAQAEDG
QTPLQIALDK LSHTLTILVV VISLLVFATG FIKHGAEMLG NFDLVLSTFM VAVSLAVAAI
PEGLVAVVTI VLSMGVTRMS ERHAIVRRLT AVETLGCTQV ICSDKTGTLT QNKMTVVRHE
TENLDAHVRT MALCSDATWD DIEQVAKGEP TEAALVADAA KLGYTTSDLA SSRPRIGEAP
FDSSRKMMSV VVRTRSGKVV QHTKGAPDEV LARCTKIMTS DGIVDLTDEA RSEILAQNKS
MADQALRVMA SARRDWGTEA PQSYDPATLE HDMVFVGLSG MIDPVRPEVK SAVAEAHEAG
MRTVMITGDH IDTAVAIAIE LGIIADRSQA ITGAQLDKIS DEEFEQRIET IGVYARVQPE
HKVRIVDTWR KKGMVTAMTG DGVNDAPSIK RADIGIGMGI TGTDVTKGVA DMVLADDNFA
TIISACEEGR RIYDNIRKCI QFLLSSNLAE VISVFIASLV GFTILQPTHL LWINLITDSL
PALAMATEKA EPGIMKRKPR NPKDGIFAGG VGFDCLVQGS IIALLTLASY FIGHYFEYGT
FDISQVIINP EAGVEGMTMA FLTLSMVEMF HSFNMRSLRG SIFKLTSHNI WLWGSFVMSL
ILTFVVIETP LSQAFGFAEI GFKEYAMAML LAASIIPLME LYKAVMRSVQ KNKA
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