| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_1006 |
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| Symbol | |
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| ID | 8413878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1135709 |
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| End bp | 1136608 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022595 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_003180026 |
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| Protein GI | 257784809 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.530196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGTTC TTATCACTGG TGCACATGGC CAGTTAGGCA ACGAGCTCAA ACGTCTTTTT
GAATCCGGTG TCTCTGAGAT TGGTCCAATT CCAGAGGTTT TTGTTGAACC AGATGTTGAT
TATACTGATG CTGATGAACT TGATATTACC AGTTCAGAGG CAGTAAGCGC GTGGTTTGAC
CAGCATGAAC GCTATGACGT TGTTATTAAC TGTGCCGCCG CAACAAACGT AGATGGTTGT
GAAAGTAATT TTGAGGCAGC GTTTGCGGTA AATGCACTTG GTCCTATGAA TCTTGCACGA
GCTTGTAGCG CTACGCAGAC AAAGCTTGTT CAGGTTTCCA CTGATTATGT GTTTAGCGGC
AAAGAAAGCA CTCCTCGTAC AGAACAAGAT GCTCCTTATC CTGTTTCTGC ATATGGTCGA
TCTAAATTAG CGGGAGAAGG ACTTGCGCTT GCGGCAAATC CCCGAACATT TGTGGTGAGA
ACTGCATGGC TTTATGGCTA TGTTGGCAAG AACTTTGTGG CAACCATGCG CACCCTAGGC
GCCAAGTATC CAGAGATTAG TGTTGTTGAT GATCAGGTAG GTAACCCTAC CAGCGCAAAT
GATCTGGCTC ACGCAATTTT GTGTATTGCG GCCACTGAGA ACTATGGCAT CTACCACGCT
ACTAATGAGG GAACGTGTTC GTGGGCTGAT TTTGCAGAGG CTATTATGGC TGGCAGCAAT
CTTGACTGTA AGGTTACCAG AGTAACCTCT GCTCAGTGGA AAGAGCTGCA CCCAGAAAGT
GCTTCTCGCC CTGCATATTC ATCTTTGGTA AACGGACATC TTGAGAGTAC TATTGGAAAT
TGTATGAGGC CTTGGCAAGA GGCTCTTGCC ACATATCTTT CGAAGGTAGA AAGAGGTTAG
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| Protein sequence | MHVLITGAHG QLGNELKRLF ESGVSEIGPI PEVFVEPDVD YTDADELDIT SSEAVSAWFD
QHERYDVVIN CAAATNVDGC ESNFEAAFAV NALGPMNLAR ACSATQTKLV QVSTDYVFSG
KESTPRTEQD APYPVSAYGR SKLAGEGLAL AANPRTFVVR TAWLYGYVGK NFVATMRTLG
AKYPEISVVD DQVGNPTSAN DLAHAILCIA ATENYGIYHA TNEGTCSWAD FAEAIMAGSN
LDCKVTRVTS AQWKELHPES ASRPAYSSLV NGHLESTIGN CMRPWQEALA TYLSKVERG
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