| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0993 |
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| Symbol | |
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| ID | 8413865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 1122075 |
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| End bp | 1122632 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022582 |
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| Product | deoxycytidine triphosphate deaminase |
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| Protein accession | YP_003180013 |
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| Protein GI | 257784796 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGTCCTTT CTGATCGCGA CATTAAAGCC GAGATTGCTG CTGGTCGTAT CGTTATTGAA
CCTTTATGCG AGAAAAACGT GCAGCCTGCA TCGGTTGACG TATGTCTTGG TTCAAACTTT
AGAATCTTTC GCAATTCTAC GCATACCTCA ATTGATCCGC TTGTAGCTCA AGAAGGTCTT
ACTGAGTCAA TTGATGTTCC AGAGGGAGAA GTTTTTGTTC TTCATCCTGG TCAGTTTGCG
CTTGGTACTA CTCTTGAGCG TATTGCTATT CCTGACGATA TTCTTGGCAA ACTTGAAGGC
AAGTCCACCT TAGGACGCTT GGGTCTTATG ATTCATTCAA CTGCAGGTTA TGTTGATCCA
GGTTGGGATG GAGAGCTTAC GCTGGAGCTT TCTAACGTTG CTAACCTTCC GATTATTTTG
CATCCTGGCA TGAGGATTGG TCAGCTTTCT TTTGAGCGTA TGAGTTCTCC TGTTGAGCGT
CCTTATGGCT GTGAAAATCT TGGCAGTCAT TATCAGGGTC AGCGCGGAGC AACTCCTTCG
CATGTTCTTT CTAAGTAG
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| Protein sequence | MVLSDRDIKA EIAAGRIVIE PLCEKNVQPA SVDVCLGSNF RIFRNSTHTS IDPLVAQEGL
TESIDVPEGE VFVLHPGQFA LGTTLERIAI PDDILGKLEG KSTLGRLGLM IHSTAGYVDP
GWDGELTLEL SNVANLPIIL HPGMRIGQLS FERMSSPVER PYGCENLGSH YQGQRGATPS
HVLSK
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